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Platform GPL17878 Query DataSets for GPL17878
Status Public on Nov 02, 2013
Title NimbleGen Mouse MM9 Deluxe Promoter Array (100718_MM9_Promoter_MeDIP_HX1)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer NimbleGen
Manufacture protocol standard NimbleGen protocol
 
Description genome build mm9
100718_MM9_Promoter_MeDIP_HX1.ndf
100718_MM9_Promoter_MeDIP_HX1.pos
 
Submission date Nov 01, 2013
Last update date Nov 02, 2013
Contact name Moshe Szyf
E-mail(s) moshe.szyf@mcgill.ca
Organization name McGill University
Department Pharmacology
Street address McIntyre Medical Building, 3655 Promenade Sir William Osler, Room 1309
City Montreal
State/province Quebec
ZIP/Postal code H3G 1Y6
Country Canada
 
Samples (38) GSM1257585, GSM1257586, GSM1328838, GSM1328839, GSM1328840, GSM1328841 
Series (7)
GSE52017 Low paternal dietary folate alters the sperm epigenome and is associated with negative pregnancy outcomes
GSE55052 Study of the impact of G9a on DNA methylation in mouse embryonic cells [array]
GSE70388 SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers [array]

Data table header descriptions
ID
SEQ_ID
RANGE
CHROMOSOME
RANGE_START
RANGE_END
LENGTH
SEQUENCE
RANGE_GB GenBank accession

Data table
ID SEQ_ID RANGE CHROMOSOME RANGE_START RANGE_END LENGTH SEQUENCE RANGE_GB
1 CHR10FS100050354 chr10:100046819-100060093 10 100050354 100050403 50 TCTCATCTAGCATGTGCAATACTCTGGGGTTTATCCTGAGCTACTAACCT NC_000076.5
2 CHR10FS100050464 chr10:100046819-100060093 10 100050464 100050513 50 CAGAGGTCGCGTAGTGGGTGCAAGAGGATTCGGAAGCCCTGTGAATGTAT NC_000076.5
3 CHR10FS100050969 chr10:100046819-100060093 10 100050969 100051020 52 GAGGGGACAACCTAAATTATTAAGAAAATGACACGAGGAAACCTCTTTGTAC NC_000076.5
4 CHR10FS100054458 chr10:100046819-100060093 10 100054458 100054515 58 GAGCACTCTGGAAATAAAGCATTTGCTATTGGATGACACGAATTCTCTTTTCAGGATG NC_000076.5
5 CHR10FS100059892 chr10:100046819-100060093 10 100059892 100059941 50 GGGTTCATGCTCTAGGATAGGCCCCCATATACATCTCTATTCTGGAATAT NC_000076.5
6 CHR10FS100049869 chr10:100046819-100060093 10 100049869 100049925 57 TCTAGCAGAGATGGCCTCTGTCTCAGGCCATATTTTCAGAAAATGATAAAAACATGG NC_000076.5
7 CHR10FS100056692 chr10:100046819-100060093 10 100056692 100056757 66 TATATGTGATATAATTCAAATTTCAGAGCATCACACAATCGAGGTTCTAATTCCTCGATATCAACA NC_000076.5
8 CHR10FS100053768 chr10:100046819-100060093 10 100053768 100053817 50 TTTATTCATTCGGAGGGCTGATTTTGCCATGCTGTCAGCTGTCAAGAGGT NC_000076.5
9 CHR10FS100058862 chr10:100046819-100060093 10 100058862 100058911 50 AGCCTGACTCTTGGAGTAAGCCTCCCTTCAATAGGGCCATATCTATATTC NC_000076.5
10 CHR10FS100052169 chr10:100046819-100060093 10 100052169 100052221 53 GTAAGGGATTGGAAACCCAGAGAAGTTTAGAAAATACTTTCAGACATTCCCTA NC_000076.5
11 CHR10FS100053653 chr10:100046819-100060093 10 100053653 100053702 50 AGAAGTGATAGGAAAAGGAACGAACCTAAAAGAGGAAAAGGAAGAGTTTG NC_000076.5
12 CHR10FS100049254 chr10:100046819-100060093 10 100049254 100049309 56 CCTGTTCTACCACACCAGCTCACCTACCCTTTTTGTTTAAAAATGTGATCACAGTA NC_000076.5
13 CHR10FS100051663 chr10:100046819-100060093 10 100051663 100051712 50 GATGCTCCCGCTTGGCTGAAGGCTCAGCTTTCACCTCCGTCACAAACACA NC_000076.5
14 CHR10FS100052868 chr10:100046819-100060093 10 100052868 100052917 50 ACACACACAATTTTACACAAAACAAAGGGGTTGGTGTAGGGAGAGAGGAC NC_000076.5
15 CHR10FS100059052 chr10:100046819-100060093 10 100059052 100059116 65 TCATCCAGCATAGGCTCAACGCATGCACTTGCATGTTTTATATTCTGAATAGAGCTAATTTCATT NC_000076.5
16 CHR10FS100059347 chr10:100046819-100060093 10 100059347 100059396 50 CCTTTGAACCTCAAGGACCACCAGCTCTGGTGTGAGATGAGGGATTTTCC NC_000076.5
17 CHR10FS100051263 chr10:100046819-100060093 10 100051263 100051312 50 GCAAGAAATTACACGAGGTCTGATTTGCGTGACCTAGTTAGGCTAGCTGT NC_000076.5
18 CHR10FS100055502 chr10:100046819-100060093 10 100055502 100055559 58 TATGTCAATTTTATGTTAGTTTTCATATAACATTTTTGCATATATTATTCTTTTCAAA NC_000076.5
19 CHR10FS100057597 chr10:100046819-100060093 10 100057597 100057653 57 TTCCTGTCACGTGACATCAGTGTGCATTTATTGGATGCCTAAATGTATTTTCTCCCA NC_000076.5
20 CHR10FS100047825 chr10:100046819-100060093 10 100047825 100047874 50 TCATTTTCCACAACGGCAATCCGCATGCCCATCAGTGACTGAAGTGAACA NC_000076.5

Total number of rows: 2064266

Table truncated, full table size 277846 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL17878_100718_MM9_Promoter_MeDIP_HX1.ndf.gz 135.8 Mb (ftp)(http) NDF
GPL17878_100718_MM9_Promoter_MeDIP_HX1.pos.gz 16.8 Mb (ftp)(http) POS

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