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Platform GPL179 Query DataSets for GPL179
Status Public on Jun 27, 2002
Title SVA
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
 
Description A microarray with 6720 spot features.
Tip Configuration: Standard 4-tip
Columns per Sector: 42
Rows per Sector: 40
Column Spacing: 157
Row Spacing: 157
 
Submission date May 22, 2002
Last update date May 26, 2005
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (12) GSM1715, GSM1716, GSM1717, GSM1718, GSM1719, GSM1720 
Series (3)
GSE48 Secreted and membrane-associated genes
GSE49 DNA copy-number changes
GSE4175 Genome-Scale Identification of Membrane-Associated Human mRNAs

Data table header descriptions
ID unique spot identifier
NAME name of spot
CLONE_ID cDNA clone identifier
GENE_SYM gene symbol
GENE_NAME gene name, description
UNIGENE NCBI UniGene cluster identifier
GB_ACC GenBank accession number
SPOT_ID
PREFERRED_NAME preferred gene name
SECTOR spot sector grid coordinate
SECTORROW spot row grid coordinate
SECTORCOL spot column grid coordinate
SOURCE
PLATE clone plate identifier
PROW clone plate row
PCOL clone plate column
FAILED
IS_VERIFIED
IS_CONTAMINATED

Data table
ID NAME CLONE_ID GENE_SYM GENE_NAME UNIGENE GB_ACC SPOT_ID PREFERRED_NAME SECTOR SECTORROW SECTORCOL SOURCE PLATE PROW PCOL FAILED IS_VERIFIED IS_CONTAMINATED
1 TOTAL HUMAN TOTAL HUMAN 1 1 1 jon pollack:384(1A1) 1 A 1 0 N U
2 COT-1 COT-1 1 1 2 jon pollack:384(1A3) 1 A 3 0 N U
3 HERING SPERM HERING SPERM 1 1 3 jon pollack:384(1A5) 1 A 5 0 N U
4 LAMBDA LAMBDA 1 1 4 jon pollack:384(1A7) 1 A 7 0 N U
5 BLUESCRIPT BLUESCRIPT 1 1 5 jon pollack:384(1A9) 1 A 9 0 N U
6 POLY (DA) POLY (DA) 1 1 6 jon pollack:384(1A11) 1 A 11 0 N U
7 E. COLI 10 E. COLI 10 1 1 7 jon pollack:384(1C1) 1 C 1 0 N U
8 E. COLI 29 E. COLI 29 1 1 8 jon pollack:384(1C3) 1 C 3 0 N U
9 E. COLI 33 E. COLI 33 1 1 9 jon pollack:384(1C5) 1 C 5 0 N U
10 E. COLI 35 E. COLI 35 1 1 10 jon pollack:384(1C7) 1 C 7 0 N U
11 E. COLI 36 E. COLI 36 1 1 11 jon pollack:384(1C9) 1 C 9 0 N U
12 E. COLI 38 E. COLI 38 1 1 12 jon pollack:384(1C11) 1 C 11 0 N U
13 2030 IMAGE:268412 MCF2 MCF.2 cell line derived transforming sequence 89543 N23406 DBL proto-oncogene 1 1 13 jon pollack:384(1E1) 1 E 1 0 N U
14 23097 IMAGE:271478 MXI1 MAX-interacting protein 1 118630 N35022 Mad2=MXI-1=MAX-binding protein=antagonizer of myc transcript 1 1 14 jon pollack:384(1E3) 1 E 3 0 N U
15 116628 IMAGE:417066 DXF68S1E DNA segment, numerous copies, expressed probes (GS1 gene) 78991 W87377 1 1 15 jon pollack:384(1E5) 1 E 5 0 N U
16 115646 IMAGE:360067 OAZ1 ornithine decarboxylase antizyme 1 125078 AA035802 1 1 16 jon pollack:384(1E7) 1 E 7 0 N U
17 112971 IMAGE:209059 APXL apical protein, Xenopus laevis-like 2391 H60731 1 1 17 jon pollack:384(1E9) 1 E 9 0 N U
18 116734 IMAGE:418239 AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 75313 W90290 1 1 18 jon pollack:384(1E11) 1 E 11 0 N U
19 118500 IMAGE:509944 VDAC1 voltage-dependent anion channel 1 149155 AA053367 1 1 19 jon pollack:384(1G1) 1 G 1 0 N U
20 125624 IMAGE:564511 LDHA lactate dehydrogenase A 2795 AA121562 1 1 20 jon pollack:384(1G3) 1 G 3 0 N U

Total number of rows: 6720

Table truncated, full table size 804 Kbytes.






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