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Platform GPL18709

Query DataSets for GPL18709

Status

Public on Jun 10, 2017

Title

Agilent-018818 human 8x60k oligo microarray [CCDP_AGILENT_V2_30BP; Probe Name version]

Technology type

in situ oligonucleotide

Distribution

custom-commercial

Organism

Homo sapiens

Manufacturer

Agilent Technologies

Manufacture protocol

Custom Oligo Microarray 8x60k (Design ID: 018818)see manufacturer's web site at http://www.agilent.com/

Submission date

May 19, 2014

Last update date

Jun 10, 2017

Contact name

Ryo Matoba

E-mail(s)

dnachip-support@dna-chip.co.jp

Phone

+81-045-500-5211

Organization name

DNAChipResearchInc

Street address

suehiro-cho1-1-43

City

Yokohama-shi, Tsurumi-ku

State/province

Kanagawa-ken

ZIP/Postal code

230-0045

Country

Japan

Samples (300)

More...

GSM1409811, GSM1409812, GSM1409813, GSM1409814, GSM1409815, GSM1409816

Series (1)

GSE58394

Gene expression signature as a predictor of recurrence in stage II Colorectal cancer

Data table header descriptions
ID	Probe Name
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
GENE_SYMBOL
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
SEQUENCE

Data table
ID	SPOT_ID	CONTROL_TYPE	REFSEQ	GB_ACC	GENE_SYMBOL	ACCESSION_STRING	CHROMOSOMAL_LOCATION	DESCRIPTION	SEQUENCE
CCDP0200001	CCDP0200001	FALSE	NM_000017	NM_000017	ACADS	NM_000017\|ref\|NM_000017	unmapped	acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain	CGACGCCCGCATCACTGAGATCTACGAGGG
CCDP0200002	CCDP0200002	FALSE	NM_000017	NM_000017	ACADS	NM_000017\|ref\|NM_000017	unmapped	acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain	CGGCATGGGCTACGTGACAGAGATGCCGGC
CCDP0200003	CCDP0200003	FALSE	NM_000017	NM_000017	ACADS	NM_000017\|ref\|NM_000017	unmapped	acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain	GCGACACTCAGGGACACCTCAGTTGTCCTC
CCDP0200004	CCDP0200004	FALSE	NM_000018	NM_000018	ACADVL	NM_000018\|ref\|NM_000018	unmapped	acyl-Coenzyme A dehydrogenase, very long chain	GGGCCTCAAGATCCCTGAGTGAGGGCCACC
CCDP0200005	CCDP0200005	FALSE	NM_000026	NM_000026	ADSL	NM_000026\|ref\|NM_000026	unmapped	adenylosuccinate lyase	GCACACTGGATGATAGTGCCAACCGACGGA
CCDP0200006	CCDP0200006	FALSE	NM_000030	NM_000030	AGXT	NM_000030\|ref\|NM_000030	unmapped	alanine-glyoxylate aminotransferase	TGTGACGACCAGCCCAGGATGTACCATCAC
CCDP0200007	CCDP0200007	FALSE	NM_000034	NM_000034	ALDOA	NM_000034\|ref\|NM_000034	unmapped	aldolase A, fructose-bisphosphate	GTGTCGTCTGTGAATGCTAAGTCCATCACC
CCDP0200008	CCDP0200008	FALSE	NM_000038	NM_000038	APC	NM_000038\|ref\|NM_000038	unmapped	adenomatosis polyposis coli	TGTCCTTGTGAGTCCATCTAACATCATAAT
CCDP0200009	CCDP0200009	FALSE	NM_000039	NM_000039	APOA1	NM_000039\|ref\|NM_000039	unmapped	apolipoprotein A-I	CCGGTGCTCAGAATAAACGTTTCCAAAGTG
CCDP0200010	CCDP0200010	FALSE	NM_000043	NM_000043	FAS	NM_000043\|ref\|NM_000043	unmapped	Fas (TNF receptor superfamily, member 6)	CAGTGTATGTTAGTACAAATGTCTATCCAC
CCDP0200011	CCDP0200011	FALSE	NM_000045	NM_000045	ARG1	NM_000045\|ref\|NM_000045	unmapped	arginase, liver	TGGATGCTCACACTGATATCAACACTCCAC
CCDP0200012	CCDP0200012	FALSE	NM_000051	NM_000051	ATM	NM_000051\|ref\|NM_000051	unmapped	ataxia telangiectasia mutated (includes complementation groups A, C and D)	GATGGAAAGCTTGGGTGTGATCTTCAGTAT
CCDP0200013	CCDP0200013	FALSE	NM_000059	NM_000059	BRCA2	NM_000059\|ref\|NM_000059	unmapped	breast cancer 2, early onset	ATACTGAGTATTTGGCGTCCATCATCAGAT
CCDP0200014	CCDP0200014	FALSE	NM_000061	NM_000061	BTK	NM_000061\|ref\|NM_000061	unmapped	Bruton agammaglobulinemia tyrosine kinase	GGCCTACGTCTCTACAGGCCTCATCTGGCT
CCDP0200015	CCDP0200015	FALSE	NM_000067	NM_000067	CA2	NM_000067\|ref\|NM_000067	unmapped	carbonic anhydrase II	TTGTTCACAGCATGTAGGGTGATGAGCACT
CCDP0200016	CCDP0200016	FALSE	NM_000067	NM_000067	CA2	NM_000067\|ref\|NM_000067	unmapped	carbonic anhydrase II	TGAGTGCAAATCCATAGCACAAGATAAATT
CCDP0200017	CCDP0200017	FALSE	NM_000067	NM_000067	CA2	NM_000067\|ref\|NM_000067	unmapped	carbonic anhydrase II	ACATCGACACTCATACAGCCAAGTATGACC
CCDP0200018	CCDP0200018	FALSE	NM_000075	NM_000075	CDK4	NM_000075\|ref\|NM_000075	unmapped	cyclin-dependent kinase 4	TACCTGAGATGGAGGAGTCGGGAGCACAGC
CCDP0200019	CCDP0200019	FALSE	NM_000076	NM_000076	CDKN1C	NM_000076\|ref\|NM_000076	unmapped	cyclin-dependent kinase inhibitor 1C (p57, Kip2)	CCCGGACGCGGCGCCTCAAGAGAGCGCCGA
CCDP0200020	CCDP0200020	FALSE	NM_000088	NM_000088	COL1A1	NM_000088\|ref\|NM_000088	unmapped	collagen, type I, alpha 1	CTGTCGATGGCTGCACGAGTCACACCGGAG

Total number of rows: 3127

Table truncated, full table size 479 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
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Supplementary file	Size	Download	File type/resource
GPL18709_018818_D_GEO_20140515_v2.txt.gz	805.7 Kb	(ftp)(http)	TXT