GEO help: Mouse over screen elements for information.
Status
Public on Mar 31, 2015
Title
nCounter PanCancer Immune Profiling Panel
Technology type
other
Distribution
commercial
Organism
Homo sapiens
Manufacturer
NanoString
Manufacture protocol
See manufacturer's website (http://www.nanostring.com )
Submission date
Mar 30, 2015
Last update date
Mar 31, 2015
Contact name
NanoString Technologies
Organization name
NanoString Technologies
Street address
530 Fairview Ave N | Suite 2000
City
Seattle
ZIP/Postal code
98109
Country
USA
Samples (1155)
GSM2107242 , GSM2107243 , GSM2107244 , GSM2107245 , GSM2107246 , GSM2107247
GSM2107248 ,
GSM2107249 ,
GSM2107250 ,
GSM2107251 ,
GSM2107252 ,
GSM2107253 ,
GSM2107254 ,
GSM2107255 ,
GSM2107256 ,
GSM2107257 ,
GSM2107258 ,
GSM2107259 ,
GSM2107260 ,
GSM2107261 ,
GSM2107262 ,
GSM2107263 ,
GSM2107264 ,
GSM2107265 ,
GSM2251547 ,
GSM2251548 ,
GSM2251549 ,
GSM2251550 ,
GSM2251551 ,
GSM2251552 ,
GSM2251553 ,
GSM2251554 ,
GSM2251555 ,
GSM2251556 ,
GSM2251557 ,
GSM2251558 ,
GSM2251559 ,
GSM2251560 ,
GSM2251561 ,
GSM2251562 ,
GSM2251563 ,
GSM2251564 ,
GSM2251565 ,
GSM2251566 ,
GSM2251567 ,
GSM2251568 ,
GSM2251569 ,
GSM2251570 ,
GSM2251571 ,
GSM2251572 ,
GSM2251573 ,
GSM2251574 ,
GSM2251575 ,
GSM2410812 ,
GSM2410813 ,
GSM2410814 ,
GSM2410815 ,
GSM2410816 ,
GSM2410817 ,
GSM2410818 ,
GSM2410819 ,
GSM2410820 ,
GSM2410821 ,
GSM2410822 ,
GSM2410823 ,
GSM2410824 ,
GSM2410825 ,
GSM2410826 ,
GSM2410827 ,
GSM2410828 ,
GSM2410829 ,
GSM2410830 ,
GSM2410831 ,
GSM2410832 ,
GSM2410833 ,
GSM2410834 ,
GSM2410835 ,
GSM2410836 ,
GSM2410837 ,
GSM2410838 ,
GSM2410839 ,
GSM2410840 ,
GSM2410841 ,
GSM2410842 ,
GSM2410843 ,
GSM2410844 ,
GSM2410845 ,
GSM2410846 ,
GSM2410847 ,
GSM2410848 ,
GSM2410849 ,
GSM2410850 ,
GSM2410851 ,
GSM2410852 ,
GSM2410853 ,
GSM2410854 ,
GSM2410855 ,
GSM2410856 ,
GSM2410857 ,
GSM2410858 ,
GSM2410859 ,
GSM2410860 ,
GSM2410861 ,
GSM2410862 ,
GSM2410863 ,
GSM2410864 ,
GSM2410865 ,
GSM2410866 ,
GSM2410867 ,
GSM2410868 ,
GSM2410869 ,
GSM2410870 ,
GSM2410871 ,
GSM2410872 ,
GSM2410873 ,
GSM2410874 ,
GSM2410875 ,
GSM2410876 ,
GSM2410877 ,
GSM2410878 ,
GSM2410879 ,
GSM2410880 ,
GSM2410881 ,
GSM2410882 ,
GSM2410883 ,
GSM2410884 ,
GSM2410885 ,
GSM2410886 ,
GSM2410887 ,
GSM2410888 ,
GSM2410889 ,
GSM2410890 ,
GSM2410891 ,
GSM2410892 ,
GSM2410893 ,
GSM2410894 ,
GSM2410895 ,
GSM2410896 ,
GSM2410897 ,
GSM2410898 ,
GSM2410899 ,
GSM2410900 ,
GSM2410901 ,
GSM2410902 ,
GSM2410903 ,
GSM2410904 ,
GSM2410905 ,
GSM2410906 ,
GSM2410907 ,
GSM2410908 ,
GSM2445676 ,
GSM2445677 ,
GSM2445678 ,
GSM2445679 ,
GSM2445680 ,
GSM2445681 ,
GSM2445682 ,
GSM2445683 ,
GSM2445684 ,
GSM2445685 ,
GSM2445686 ,
GSM2445687 ,
GSM2445688 ,
GSM2445689 ,
GSM2445690 ,
GSM2445691 ,
GSM2445692 ,
GSM2445693 ,
GSM2445694 ,
GSM2445695 ,
GSM2445696 ,
GSM2445697 ,
GSM2445698 ,
GSM2445699 ,
GSM2445700 ,
GSM2445701 ,
GSM2445702 ,
GSM2445703 ,
GSM2445704 ,
GSM2445705 ,
GSM2445706 ,
GSM2445707 ,
GSM2445708 ,
GSM2445709 ,
GSM2445710 ,
GSM2445711 ,
GSM2445712 ,
GSM2445713 ,
GSM2445714 ,
GSM2445715 ,
GSM2445716 ,
GSM2445717 ,
GSM2445718 ,
GSM2445719 ,
GSM2445720 ,
GSM2445721 ,
GSM2445722 ,
GSM2445723 ,
GSM2445724 ,
GSM2445725 ,
GSM2445726 ,
GSM2445727 ,
GSM2445728 ,
GSM2445729 ,
GSM2445730 ,
GSM2445731 ,
GSM2445732 ,
GSM2445733 ,
GSM2445734 ,
GSM2445735 ,
GSM2445736 ,
GSM2445737 ,
GSM2445738 ,
GSM2445739 ,
GSM2445740 ,
GSM3104769 ,
GSM3104770 ,
GSM3104771 ,
GSM3104772 ,
GSM3104773 ,
GSM3104774 ,
GSM3104775 ,
GSM3104776 ,
GSM3104777 ,
GSM3104778 ,
GSM3104779 ,
GSM3104780 ,
GSM3104781 ,
GSM3104782 ,
GSM3104783 ,
GSM3104784 ,
GSM3104785 ,
GSM3104786 ,
GSM3104787 ,
GSM3104788 ,
GSM3104789 ,
GSM3104790 ,
GSM3104791 ,
GSM3104792 ,
GSM3104793 ,
GSM3104794 ,
GSM3104795 ,
GSM3104796 ,
GSM3104797 ,
GSM3104798 ,
GSM3104799 ,
GSM3104800 ,
GSM3104801 ,
GSM3104802 ,
GSM3104803 ,
GSM3104804 ,
GSM3670785 ,
GSM3670786 ,
GSM3670787 ,
GSM3670788 ,
GSM3670789 ,
GSM3670790 ,
GSM3670791 ,
GSM3670792 ,
GSM3670793 ,
GSM3670794 ,
GSM3670795 ,
GSM3670796 ,
GSM3670797 ,
GSM3670798 ,
GSM3670799 ,
GSM3670800 ,
GSM3670801 ,
GSM3670802 ,
GSM3670803 ,
GSM3670804 ,
GSM3670805 ,
GSM3714340 ,
GSM3714341 ,
GSM3714342 ,
GSM3714343 ,
GSM3714344 ,
GSM3714345 ,
GSM3714346 ,
GSM3714347 ,
GSM3714348 ,
GSM3714349 ,
GSM3714350 ,
GSM3714351 ,
GSM3714352 ,
GSM3714353 ,
GSM3714354 ,
GSM3714355 ,
GSM3714356 ,
GSM3714357 ,
GSM3714358 ,
GSM3714359 ,
GSM3714360 ,
GSM3714361 ,
GSM3714362 ,
GSM3714363 ,
GSM3834376 ,
GSM3834377 ,
GSM3834378 ,
GSM3834379 ,
GSM3834380 ,
GSM3834381 ,
GSM3834382 ,
GSM3834383 ,
GSM3834384 ,
GSM3834385 ,
GSM3834386 ,
GSM3834387 ,
GSM3834388 ,
GSM3834389 ,
GSM3834390 ,
GSM3834391 ,
GSM3834392 ,
GSM3834393 ,
GSM3834394 ,
GSM3834395 ,
GSM3860475 ,
GSM3860476 ,
GSM3860477 ,
GSM3860478 ,
GSM3860479 ,
GSM3860480 ,
GSM3860481 ,
GSM3860482 ,
GSM3860483 ,
GSM3860484 ,
GSM3860485 ,
GSM3860486 ,
GSM3860487 ,
GSM3860488 ,
GSM3860489 ,
GSM3860490 ,
GSM3860491 ,
GSM3860492 ,
GSM3860493 ,
GSM3860494 ,
GSM3860495 ,
GSM3860496 ,
GSM3860497 ,
GSM3860498 ,
GSM3860499 ,
GSM3860500 ,
GSM3860501 ,
GSM3860502 ,
GSM3860503 ,
GSM3860504 ,
GSM3860505 ,
GSM3860506 ,
GSM3860507 ,
GSM3860508 ,
GSM3860509 ,
GSM3860510 ,
GSM3860511 ,
GSM3860512 ,
GSM3860513 ,
GSM3860514 ,
GSM3860515 ,
GSM3860516 ,
GSM3860517 ,
GSM3860518 ,
GSM3860519 ,
GSM3860520 ,
GSM3860521 ,
GSM3860522 ,
GSM3860523 ,
GSM3860524 ,
GSM3860525 ,
GSM3860526 ,
GSM3860527 ,
GSM3860528 ,
GSM3860529 ,
GSM3860530 ,
GSM3860531 ,
GSM3860532 ,
GSM3860533 ,
GSM3860534 ,
GSM3860535 ,
GSM3860536 ,
GSM3860537 ,
GSM3860538 ,
GSM3860539 ,
GSM3860540 ,
GSM3860541 ,
GSM3860542 ,
GSM3860543 ,
GSM3860544 ,
GSM3860545 ,
GSM3860546 ,
GSM3860547 ,
GSM3860548 ,
GSM3860549 ,
GSM3860550 ,
GSM3860551 ,
GSM3860552 ,
GSM3860553 ,
GSM3860554 ,
GSM3860555 ,
GSM3860556 ,
GSM3860557 ,
GSM3860558 ,
GSM3860559 ,
GSM3860560 ,
GSM3860561 ,
GSM3860562 ,
GSM3860563 ,
GSM3860564 ,
GSM3860565 ,
GSM3860566 ,
GSM3860567 ,
GSM3860568 ,
GSM3860569 ,
GSM3860570 ,
GSM3860571 ,
GSM3860572 ,
GSM3860573 ,
GSM3860574 ,
GSM3860575 ,
GSM3860576 ,
GSM3860577 ,
GSM3860578 ,
GSM3860579 ,
GSM3860580 ,
GSM4190059 ,
GSM4190060 ,
GSM4190061 ,
GSM4190062 ,
GSM4190063 ,
GSM4190064 ,
GSM4190065 ,
GSM4190066 ,
GSM4190067 ,
GSM4190068 ,
GSM4190069 ,
GSM4190070 ,
GSM4190071 ,
GSM4190072 ,
GSM4190073 ,
GSM4190074 ,
GSM4190075 ,
GSM4190076 ,
GSM4190077 ,
GSM4190078 ,
GSM4190079 ,
GSM4190080 ,
GSM4190081 ,
GSM4190082 ,
GSM4192444 ,
GSM4192445 ,
GSM4192446 ,
GSM4192447 ,
GSM4192448 ,
GSM4192449 ,
GSM4192450 ,
GSM4192451 ,
GSM4192452 ,
GSM4192453 ,
GSM4192454 ,
GSM4192455 ,
GSM4192456 ,
GSM4192457 ,
GSM4192458 ,
GSM4192459 ,
GSM4192460 ,
GSM4192461 ,
GSM4192462 ,
GSM4192463 ,
GSM4192464 ,
GSM4192465 ,
GSM4192466 ,
GSM4192467 ,
GSM4192468 ,
GSM4192469 ,
GSM4192470 ,
GSM4192471 ,
GSM4192472 ,
GSM4192473 ,
GSM4192474 ,
GSM4192475 ,
GSM4192476 ,
GSM4192477 ,
GSM4192478 ,
GSM4192479 ,
GSM4192480 ,
GSM4192481 ,
GSM4192482 ,
GSM4192483 ,
GSM4192484 ,
GSM4192485 ,
GSM4192486 ,
GSM4192487 ,
GSM4192488 ,
GSM4192489 ,
GSM4192490 ,
GSM4192491 ,
GSM4192492 ,
GSM4192493 ,
GSM4192494 ,
GSM4192495 ,
GSM4192496 ,
GSM4192497 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (36)
GSE79850
Digital expression profiling highlights a distinct live RNA signature in high-risk Primary Biliary Cholangitis (PBC)
GSE84797
Multi-parametric profiling of non-small cell lung cancers reveals distinct immunophenotypes [Nanostring]
GSE84799
Multi-parametric profiling of non-small cell lung cancers reveals distinct immunophenotypes
GSE90698
Immuno-related transcripts in biliary tract cancers
GSE90699
Immuno-related transcripts in the microenvironment of biliary tract cancers
GSE93157
Programmed death 1 receptor blockade and immune-related gene expression profiling in non-small cell lung carcinoma, head and neck squamous cell carcinoma and melanoma
GSE113387
Gene expression profile of CAR T cells compared to control ΔCAR T cells
GSE113388
Gene expression profile of TBBR modified T cells compared to control ΔTGFbRII T cells
GSE113389
Gene expression profile of 4/7 ICR modified T cells compared to control ΔIL4R T cells
GSE113390
Gene expression profile of SmarT-cells compared to control T cells modified to express ΔCAR, ΔTGFbRII and ΔIL4R
GSE113391
Gene expression profile of SmarT-cells compared to control 1G CAR T cells
GSE128293
Large B-Cell Lymphomas in Pediatric and Young Adults Display Clinically Relevant Molecular Features Distinguishable from Adult Counterparts [Nanostring]
GSE128294
Large B-Cell Lymphomas in Pediatric and Young Adults Display Clinically Relevant Molecular Features Distinguishable from Adult Counterparts
GSE129492
Immune impact of neoadjuvant chemo/radio-therapy in the pancreatic cancer microenvironment
GSE132006
Comparison of gene expression profiles obtained from whole blood and peripheral blood mononuclear cells (PBMCs)
GSE132348
A gene expression-based model to predict metabolic response after two courses of ABVD in patients with classical Hodgkin Lymphoma
GSE140901
Exploration of exhausted CD8 T cell markers to predict response to immune checkpoint inhibitor therapy for hepatocellular carcinoma
GSE141016
Tumor immune microenvironment difference primary and metastatic hepatocellular carcinoma
GSE148392
Immune-Related Gene Expressions in EOC using Nanostring analysis
GSE159407
Tracking immune cells from brain metastasis microenvironment to the cerebrospinal fluid
GSE161116
Comparative Analysis of the Tumor Immune-Microenvironment of Primary and Brain Metastases of Non-Small-Cell Lung Cancer
GSE164104
Gene expression in human recurrent glioblastoma before and after inoculation with the oncolytic herpes simplex virus G207 using NanoString pancancer immune profiling gene expression panel
GSE164105
Gene expression in human recurrent glioblastoma before and after inoculation with the oncolytic herpes simplex virus G207
GSE169033
Immune evolution from preneoplasia to invasive lung adenocarcinomas and underlying molecular features
GSE184313
PanCancer Immune Nanostring analysis of PBMCs stimulated with Innate-like T-cell agonists
GSE184662
Radiogenomics features of tumor dissemination in ABVD treated cHL patients
GSE186537
Gene expression analysis of the bone marrow microenvironment reveals distinct immunotypes in smoldering multiple myeloma associated to progression to symptomatic disease
GSE190169
Tumor infiltrating CD8+ Tex cells dictate divergent survival outcomes in pre- vs post-menopausal ER+ breast cancer
GSE200131
Revealing and harnessing CD39 for the treatment of colorectal cancer and liver metastases by engineered T cells [NanoString]
GSE200133
Revealing and harnessing CD39 for the treatment of colorectal cancer and liver metastases by engineered T cells
GSE211576
Novel prognostic implications of complement activation in the tumor microenvironment for de novo metastatic BRAF V600E mutant colorectal cancer
GSE234852
Phototherapy restores deficient type I interferon production and enhances antitumor responses in mycosis fungoides [I]
GSE234854
Phototherapy restores deficient type I interferon production and enhances antitumor responses in mycosis fungoides [II]
GSE234856
Phototherapy restores deficient type I interferon production and enhances antitumor responses in mycosis fungoides
GSE272453
Profiling gene expressions of cancer-associated canonical pathways between cold and hot triple-negative breast tumors.
GSE272455
Immune profiling of lymph nodes drained to cold vs hot triple-negative breast tumors.
Data table header descriptions
ID
Official Symbol
GB_ACC
Alias
Alias / Previous Symbol
Code_Class
Class of target (Endogenous, Housekeeping, Negative, Positive)
SEQUENCE
Official Full Name
Official Full Name
SPOT_ID
Data table
ID
GB_ACC
Alias
Code_Class
SEQUENCE
Official Full Name
SPOT_ID
A2M
NM_000014.4
FWP007, S863-7, CPAMD5
Endogenous
TCCATCTCAATCCCTGTGAAGTCAGACATTGCTCCTGTCGCTCGGTTGCTCATCTATGCTGTTTTACCTACCGGGGACGTGATTGGGGATTCTGCAAAAT
alpha-2-macroglobulin
ABCB1
NM_000927.3
PGY1, MDR1, CLCS, P-gp, CD243, GP170, ABC20
Endogenous
TATAGCACTAAAGTAGGAGACAAAGGAACTCAGCTCTCTGGTGGCCAGAAACAACGCATTGCCATAGCTCGTGCCCTTGTTAGACAGCCTCATATTTTGC
ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABL1
NM_005157.3
ABL, JTK7, c-ABL, p150
Endogenous
CTGCGTGAGCTATGTGGATTCCATCCAGCAAATGAGGAACAAGTTTGCCTTCCGAGAGGCCATCAACAAACTGGAGAATAATCTCCGGGAGCTTCAGATC
c-abl oncogene 1, non-receptor tyrosine kinase
ADA
NM_000022.2
Endogenous
TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTC
adenosine deaminase
ADORA2A
NM_000675.3
ADORA2, RDC8
Endogenous
TGGCCATCGTCCTCTCCCACACCAATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGATCATTCGCAG
adenosine A2a receptor
AICDA
NM_020661.1
HIGM2, CDA2, ARP2, AID
Endogenous
GCTGCATGAAAATTCAGTTCGTCTCTCCAGACAGCTTCGGCGCATCCTTTTGCCCCTGTATGAGGTTGATGACTTACGAGACGCATTTCGTACTTTGGGA
activation-induced cytidine deaminase
AIRE
NM_000383.2
APECED, PGA1, APS1
Endogenous
CAGCGCCACCTCTTGTCAGTGCTCGGCTGTAAACAGCTCTGTGTTTCTGGGGACACCAGCCATCATGTGCCTGGAAATTAAACCCTGCCCCACTTCTCTA
autoimmune regulator
AKT3
NM_181690.1
PKBG, RAC-gamma, PRKBG
Endogenous
GGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCC
v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
ALCAM
NM_001627.3
CD166, MEMD
Endogenous
AATTCAGCATATGGAGATACCATTATCATACCTTGCCGACTTGACGTACCTCAGAATCTCATGTTTGGCAAATGGAAATATGAAAAGCCCGATGGCTCCC
activated leukocyte cell adhesion molecule
AMBP
NM_001633.3
ITI, ITIL, UTI, HCP, EDC1, HI30, IATIL, ITILC
Endogenous
CCAAATGGAACATAACCATGGAGTCCTATGTGGTCCACACCAACTATGATGAGTATGCCATTTTCCTGACCAAGAAATTCAGCCGCCATCATGGACCCAC
alpha-1-microglobulin/bikunin precursor
AMICA1
NM_153206.2
Gm638, AMICA
Endogenous
TGCTATACTATTACTCCAATCTCAGTGTGCCTATTGGGCGCTTCCAGAACCGCGTACACTTGATGGGGGACATCTTATGCAATGATGGCTCTCTCCTGCT
adhesion molecule, interacts with CXADR antigen 1
ANP32B
NM_006401.2
SSP29, PHAPI2, APRIL
Endogenous
CACCTTGGAACCTTTGAAAAAGTTAGAATGTCTGAAAAGCCTGGACCTCTTTAACTGTGAGGTTACCAACCTGAATGACTACCGAGAGAGTGTCTTCAAG
acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
ANXA1
NM_000700.1
ANX1, LPC1
Endogenous
GAAATCAGAGACATTAACAGGGTCTACAGAGAGGAACTGAAGAGAGATCTGGCCAAAGACATAACCTCAGACACATCTGGAGATTTTCGGAACGCTTTGC
annexin A1
APOE
NM_000041.2
AD2
Endogenous
GGGCTGCGTTGCTGGTCACATTCCTGGCAGGATGCCAGGCCAAGGTGGAGCAAGCGGTGGAGACAGAGCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTG
apolipoprotein E
APP
NM_000484.3
AD1
Endogenous
TAAAGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGTTATGACACACCTCCGTGTGATTTATGAGCGCATGAA
amyloid beta (A4) precursor protein
ARG1
NM_000045.2
Endogenous
AAGGAACTAAAAGGAAAGATTCCCGATGTGCCAGGATTCTCCTGGGTGACTCCCTGTATATCTGCCAAGGATATTGTGTATATTGGCTTGAGAGACGTGG
arginase, liver
ARG2
NM_001172.3
Endogenous
ATCAGAAAATCAAGCACGTGTGAGAATTTAGGAGACACTGTGCACTGACATGTTTCACAACAGGCATTCCAGAATTATGAGGCATTGAGGGGATAGATGA
arginase, type II
ATF1
NM_005171.2
TREB36
Endogenous
CAGATACTTGTGCCCAGCAATCAGGTGGTCGTACAAACTGCATCAGGAGATATGCAAACATATCAGATCCGAACTACACCTTCAGCTACTTCTCTGCCAC
activating transcription factor 1
ATF2
NM_001256090.1
CREB2, TREB7, CRE-BP1, HB16
Endogenous
GAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAG
activating transcription factor 2
ATG10
NM_001131028.1
APG10L, DKFZP586I0418, FLJ13954
Endogenous
TCAACTATATCACATCATGGCTGAGCATTGTAGGGCCAGTTGTTGGGCTGAATCTACCTCTGAGTTATGCCAAAGCAACGTCTCAGGATGAACGAAATGT
autophagy related 10
Total number of rows: 784 Table truncated, full table size 143 Kbytes .
Supplementary data files not provided