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Status
Public on Jan 03, 2003
Title
Sugarcane nylon arrays I
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Saccharum sp.
Description
Nylon membranes containing sugarcane ESTs. Plasmid clones were used. A set of sixteen 96-well plates was spotted on two nylon filters (85 mm x 125 mm) in a 4 x 4 array configuration, with a 96 pins hand-held array tool.
Contributor(s)
Nogueira FT , de Rosa VE Jr , Menossi M , Ulian EC , Arruda P Submission date
Sep 04, 2002
Last update date
May 26, 2005
Contact name
Fábio Tebaldi Nogueira
E-mail(s)
tebaldi@unicamp.br Phone
55-19-3788-1101
Organization name
Institute of Biology
Department
CBMEG
Lab
Plant Genome
Street address
City
Campinas
ZIP/Postal code
6010
Country
Brazil
Samples (12)
GSM2431 , GSM2432 , GSM2433 , GSM2434 , GSM2435 , GSM2436
Series (3)
GSE83 Cold stress in sugarcane exp1
GSE84 Cold stress in sugarcane exp2
GSE6442 Cold stress in sugarcane
Data table header descriptions ID CLONE ID Sugarcane EST identification as in the SUCEST project
GB_ACC GenBank accession number;
dbEST_Id MEMBRANE_ID nylon filter identification
col (Y) spot position on the membrane (column)
row (X) spot position on the membrane (row)
SPOT_ID
Data table ID CLONE ID GB_ACC dbEST_Id MEMBRANE_ID col (Y) row (X) SPOT_ID 1
SCRLCL6032A01
BU103170 13475873
1
1
1
2
SCEPCL6021A01
BU102806 13475509
1
3
1
3
SCRLCL6032A02
BU103171 13475874
1
5
1
4
SCEPCL6021A02
BU102807 13475510
1
7
1
5
SCRLCL6032A03
BU103172 13475875
1
9
1
6
SCEPCL6021A03
BU102808 13475511
1
11
1
7
SCRLCL6032A04
1
13
1
SCRLCL6032A04
8
SCEPCL6021A04
BU102809 13475512
1
15
1
9
SCRLCL6032A05
BU103173 13475876
1
17
1
10
SCEPCL6021A05
BU102810 13475513
1
19
1
11
SCRLCL6032A06
1
21
1
SCRLCL6032A06
12
SCEPCL6021A06
BU102811 13475514
1
23
1
13
SCRLCL6032A07
BU103174 13475877
1
25
1
14
SCEPCL6021A07
BU102812 13475515
1
27
1
15
SCRLCL6032A08
BU103175 13475878
1
29
1
16
SCEPCL6021A08
BU102813 13475516
1
31
1
17
SCRLCL6032A09
1
33
1
SCRLCL6032A09
18
SCEPCL6021A09
BU102814 13475517
1
35
1
19
SCRLCL6032A10
1
37
1
SCRLCL6032A10
20
SCEPCL6021A10
BU102815 13475518
1
39
1
3072 133 Kbytes .Supplementary data files not provided
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