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Platform GPL22311 Query DataSets for GPL22311
Status Public on Aug 11, 2016
Title 021764 Agilent Human Genotypic Designed CGH 105k Microarray [Probe name version]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol Refer to www.chem.agilent.com
 
 
Web link http://www.genotypic.co.in/micro_arrays.html?mnu=2
Submission date Aug 11, 2016
Last update date Aug 11, 2016
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (62) GSM2274540, GSM2274541, GSM2274542, GSM2274543, GSM2274544, GSM2274545 
Series (1)
GSE85514 Array CGH analysis of Oral Leukoplakia and Early Stage Oral Squamous Cell Carcinoma
Relations
Alternative to GPL10722 (Feature Number Version)

Data table header descriptions
ID
CONTROL_TYPE Hybridization Control
GB_ACC GenBank Accession number
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Genbank Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND
DESCRIPTION Protein Description
SEQUENCE Probe Sequence
SPOT_ID
SPOT_ID

Data table
ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION SEQUENCE SPOT_ID SPOT_ID
HsCGHBrightCorner pos HsCGHBrightCorner
DarkCorner pos DarkCorner
A_16_P41401808 FALSE chr21:19756286-19756345 hs|q21.1 AGAGTCAAATTGCACTTGATGAACACATAACCAAATACAGATCTGGACTATATTCCCTCA
A_14_P129683 FALSE NM_001145819 SOX6 SRY (sex determining region Y)-box 6 ref|NM_001145819|ref|NM_017508|ref|NM_001145811|ref|NM_033326 chr11:16032139-16032198 hs|p15.2 Homo sapiens SRY (sex determining region Y)-box 6 (SOX6), transcript variant 4, mRNA. TAGAATATGGTCAAGTCAAATTACCCAGAGAGATCTCTAAGAATTTGCATGTGGTCAAGT
A_14_P132273 FALSE NM_006348 COG5 component of oligomeric golgi complex 5 ref|NM_006348|ref|NM_181733|ref|NM_001161520 chr7:106789985-106790044 hs|q22.3 Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 1, mRNA. TTACCTGTCCACAAACAGCATAAATATGATCCATAAGTTTCTCCATATTGGTCCAGAATG
A_16_P03402155 FALSE chr18:70055529-70055588 hs|q22.3 CATTGAAACACCCATTAGTATCTTCCACCTTTAAAACAAAAATGAAATGAAGAGCCACCA
A_16_P00016431 FALSE ens|ENST00000376178 chr1:13065132-13065179 hs|p36.21 GCCTCTGAATGATCCAAGTTTCCCCAGAGCAGAAGAAGGAGATTGTTA
A_14_P136155 FALSE chr12:47147923-47147970 hs|q13.11 CTATTTTAGATGATATCATGGCAGCAGAGGGGTGCCTCTCCTCTGTAG
A_14_P120144 FALSE NM_001080512 BICC1 bicaudal C homolog 1 (Drosophila) ref|NM_001080512 chr10:59944705-59944764 hs|q21.1 Homo sapiens bicaudal C homolog 1 (Drosophila) (BICC1), mRNA. CTTTCAGTTTTCTACATTAGTTTGGAGTGATATGAAAGAATGATCTGTTTCACCTGCGCA
A_14_P107591 FALSE chr1:90966090-90966149 hs|p22.2 GCCTTCATCAGTGTTTGGGATGTAAAGAACCCTGTCTATTTAAAAGAGATACTGCATTTT
A_16_P19009295 FALSE AK309777 gb|AK309777|gb|AK311174 chr10:88960512-88960571 hs|q23.2 Homo sapiens cDNA, FLJ99818. AAATAAGTCCAAGTATTATTGTGTTTATGTGTATAAACCTGTGCACACACACAAACGCGT
A_14_P131677 FALSE NM_004621 TRPC6 transient receptor potential cation channel, subfamily C, member 6 ref|NM_004621 chr11:100858863-100858922 hs|q22.1 Homo sapiens transient receptor potential cation channel, subfamily C, member 6 (TRPC6), mRNA. AAAACATGACAGAAAATCAGTCTTTACCTATTACCCAGGATATAATGAGCATCTCCATCC
A_16_P01572054 FALSE chr6:122580710-122580769 hs|q22.31 AGTGAACCCATATCTGGAATACACAGTTCATTATCAGTCATTACGTATACCACGAACTTC
A_14_P110940 FALSE AF126782 gb|AF126782 chr14:59706215-59706273 hs|q23.1 Homo sapiens retinal short-chain dehydrogenase/reductase retSDR4 mRNA, complete cds. TCCCTGTCTAATGTCTATTCTCTTTGCCTTGCCCTTACTTTTGTTCAGATCAACTTTAG
A_14_P113357 FALSE NM_152763 C1orf62 chromosome 1 open reading frame 62 ref|NM_152763 chr1:109201183-109201241 hs|p13.3 Homo sapiens chromosome 1 open reading frame 62 (C1orf62), mRNA. ACTCAGAATCCAACAGAACCTTTCTGTAGAATCCAAATTGATTTTCTGAAGTCAGGTGA
A_16_P35346355 FALSE chr1:165757185-165757244 hs|q24.2 TGGTCCATACTTACATTGTCTTATATTCACTCTTGCCACATTGATCATCGAATCACCATT
A_16_P00476466 FALSE NM_001080427 THSD7B thrombospondin, type I, domain containing 7B ref|NM_001080427 chr2:137621657-137621716 hs|q22.1 Homo sapiens thrombospondin, type I, domain containing 7B (THSD7B), mRNA. TGTGGATTTCTCCTTGCTATCATTATTACAGATTTCCGTTCAGATACTTTTAGGTCAGGG
A_16_P16114132 FALSE NM_001099952 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 ref|NM_001099952|ref|NM_002222 chr3:4820118-4820177 hs|p26.2 Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), transcript variant 1, mRNA. GAAGTCATGCAAAGATTTAGTTTTTCAGGGTGAAAATGCATTTACATCGTTGACCTACTG
A_16_P00157557 FALSE chr1:119346355-119346414 hs|p12 ACTGACTCACCACCTAATCTTGCACAAGTCTCTTAATTACAGAAACCACATTCCTATTTT
A_16_P17136289 FALSE NM_001104558 ELOVL7 ELOVL family member 7, elongation of long chain fatty acids (yeast) ref|NM_001104558|ref|NM_024930 chr5:60118859-60118918 hs|q12.1 Homo sapiens ELOVL family member 7, elongation of long chain fatty acids (yeast) (ELOVL7), transcript variant 2, mRNA. TATGAGAATCTGACATAAAAAGGAAGGATGAACCTCAATTAGGAAATGTGGTTACTCACC

Total number of rows: 101757

Table truncated, full table size 21516 Kbytes.




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