NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL23119 Query DataSets for GPL23119
Status Public on Aug 03, 2017
Title SOMAscan human proteomic assay [SOMAscan Assay 1.3k]
Technology type spotted peptide or protein
Distribution custom-commercial
Organism Homo sapiens
Manufacturer SomaLogic
Manufacture protocol http://info.somalogic.com/lp_campaign_somascan-white-paper_jan-2016; http://www.tandfonline.com/doi/abs/10.1586/erm.10.89
 
 
Submission date Feb 24, 2017
Last update date Feb 24, 2017
Contact name Dr Yvonne Edwards, PhD
Organization name University of Massachusetts Medical School
Department Program in Molecular Medicine
Lab Bioinformatics Core
Street address 373 Plantation Street
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Samples (950) GSM2508127, GSM2508128, GSM2508129, GSM2508130, GSM2508131, GSM2508132 
Series (8)
GSE95368 Proteomic Comparison of Acute Myocardial Infarction and Stress Cardiomyopathy in Women
GSE119483 Identification of circulating protein biomarkers for pancreatic cancer cachexia
GSE119641 Comparing the effects of microbiota-directed therapeutic foods in gnotobiotic mice, gnotobiotic piglets and undernourished children

Data table header descriptions
ID ID
Target Protein name
UniProt Universal Protein Resource ID
Entrez_GENE_ID_LIST Entrez Gene ID
EntrezGeneSymbol Entrez Gene Symbol
SPOT_ID SeqId; SOMAmer Sequence ID

Data table
ID Target UniProt Entrez_GENE_ID_LIST EntrezGeneSymbol SPOT_ID
SL000001 Mucin-1 P15941 4582 MUC1 9176-3_3
SL000002 Vascular endothelial growth factor A P15692 7422 VEGFA 2597-8_3
SL000003 Angiogenin P03950 283 ANG 4874-3_1
SL000004 Fibroblast growth factor 2 P09038 2247 FGF2 3025-50_1
SL000006 Plasminogen activator inhibitor 1 P05121 5054 SERPINE1 2925-9_1
SL000007 Estrogen receptor P03372 2099 ESR1 2945-25_1
SL000009 Receptor tyrosine-protein kinase erbB-2 P04626 2064 ERBB2 2616-23_18
SL000011 alpha-Fetoprotein P02771 174 AFP 5792-8_2
SL000017 von Willebrand factor P04275 7450 VWF 3050-7_2
SL000019 Apolipoprotein A-I P02647 335 APOA1 2750-3_2
SL000020 Apolipoprotein B P04114 338 APOB 2797-56_2
SL000021 Insulin P01308 3630 INS 4883-56_2
SL000022 D-dimer P02671 P02675 P02679 2243 2244 2266 FGA FGB FGG 4907-56_1
SL000024 Tissue Factor P13726 2152 F3 4931-59_1
SL000027 Prostaglandin G/H synthase 2 P35354 5743 PTGS2 3761-4_2
SL000038 C-C motif chemokine 2 P13500 6347 CCL2 2578-67_2
SL000039 Interleukin-8 P10145 3576 CXCL8 3447-64_2
SL000045 Insulin-like growth factor-binding protein 3 P17936 3486 IGFBP3 2571-12_3
SL000047 Insulin-like growth factor I P05019 3479 IGF1 2952-75_2
SL000048 Vitamin K-dependent protein C P04070 5624 PROC 2961-1_2

Total number of rows: 1310

Table truncated, full table size 86 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap