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Platform GPL23960 Query DataSets for GPL23960
Status Public on Feb 16, 2018
Title Custom miRCURY LNA microRNA array (Exiqon #208410; mirBase version 16)
Technology type spotted oligonucleotide
Distribution non-commercial
Organism synthetic construct
Manufacturer Odense University Hospital, Department of Clinical Genetics, Denmark
Manufacture protocol The miRCURY LNA microRNA array ready-to-spot probe-set was purchased from Exiqon (#208410).
Probes were spotted in triplets on CodeLink HD (SurModics) activated glass slides using a Virtek ChipWriter Pro ESI spotting robot with SMP stealth pins.
Spotting was carried out in a compartment with a relative humidity of approximately 40% and a constant temperature of 23°C
Post spotting, slides were processed according to the CodeLink protocol.
 
Description custom arrays constructed using the miRCURY LNA microRNA array ready-to-spot probe-set purchased from Exiqon (#208410; mirBase version 16)
 
Submission date Aug 28, 2017
Last update date Feb 16, 2018
Contact name Ines Block
Organization name Odense University Hospital
Department Department of Clinical Genetics
Street address J.B. Winsløws Vej 4
City Odense
ZIP/Postal code 5000
Country Denmark
 
Samples (162) GSM2756270, GSM2756271, GSM2756272, GSM2756273, GSM2756274, GSM2756275 
Series (2)
GSE103161 MicroRNA profiles of 110 primary breast cancer tumors of systemically untreated, lymph node negative and estrogen receptor positive patients
GSE126125 MicroRNA profiles of primary breast cancer tumors of systematically untreated and lymph node negative patients

Data table header descriptions
ID Identification numbers matching individual probe IDs of the ready-to-spot probe library purchased from Exiqon (#208410)
miRNA_ID_LIST Probe target microRNA (miRBase version 16.0)

Data table
ID miRNA_ID_LIST
17888 hsa-let-7a-2*/mmu-let-7a-2*/rno-let-7a-2*
147162 hsa-let-7a*/mmu-let-7a-1*/mmu-let-7c-2*/rno-let-7a-1*/rno-let-7c-2*
42530 hsa-let-7a/mmu-let-7a/rno-let-7a
42769 hsa-let-7b*/mmu-let-7b*/rno-let-7b*
147165 hsa-let-7b/mmu-let-7b/rno-let-7b
42653 hsa-let-7c*
145820 hsa-let-7c/mmu-let-7c/rno-let-7c
145633 hsa-let-7d*/mmu-let-7d*/rno-let-7d*
145968 hsa-let-7d/mmu-let-7d/rno-let-7d
42743 hsa-let-7e*/mmu-let-7e*/rno-let-7e*
145846 hsa-let-7e/mmu-let-7e/rno-let-7e
17752 hsa-let-7f-1*/mmu-let-7f-1*/rno-let-7f-1*
145840 hsa-let-7f-2*
42742 hsa-let-7f/mmu-let-7f/rno-let-7f
42778 hsa-let-7g*/mmu-let-7g*
46438 hsa-let-7g/mmu-let-7g
145746 hsa-let-7i*/mmu-let-7i*/rno-let-7i*
9938 hsa-let-7i/mmu-let-7i/rno-let-7i
10916 hsa-miR-1/mmu-miR-1
145694 hsa-miR-100*

Total number of rows: 1296

Table truncated, full table size 34 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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