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Status
Public on Oct 02, 2018
Title
Littorina saxatilis NimbleGen 090824_L_saxatilis_expr_HX12 (Probe ID)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Littorina saxatilis Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Description
NimbleGen design name 090824_L_saxatilis_expr_HX12, NimbleGen OID231110. A 12X135K (12-plex high-density) expression array for 25,205 transcripts from Littorina saxatilis with five 60 nt probes per transcript. The design also includes probes to four genomic BACs (577,000 nt in total), 8,022 nt mt DNA, few heterologous mollusc transcripts, random GC and other control probes.
Submission date
Oct 01, 2018
Last update date
Oct 02, 2018
Contact name
Humberto Quesada
Organization name
Universidad de Vigo
Department
Departamento de Bioquímica, Genética e Inmunología,
Street address
Campus As Lagoas-Marcosende
City
Vigo
ZIP/Postal code
36310
Country
Spain
Samples (69)
GSM3408528 , GSM3408529 , GSM3408530 , GSM3408531 , GSM3408532 , GSM3408533
GSM3408534 ,
GSM3408535 ,
GSM3408536 ,
GSM3408537 ,
GSM3408538 ,
GSM3408539 ,
GSM3408540 ,
GSM3408541 ,
GSM3408542 ,
GSM3408543 ,
GSM3408544 ,
GSM3408545 ,
GSM3408546 ,
GSM3408547 ,
GSM3408548 ,
GSM3408549 ,
GSM3408550 ,
GSM3408551 ,
GSM3408552 ,
GSM3408553 ,
GSM3408554 ,
GSM3408555 ,
GSM3408556 ,
GSM3408557 ,
GSM3408558 ,
GSM3408559 ,
GSM3408560 ,
GSM3408561 ,
GSM3408562 ,
GSM3408563 ,
GSM3408564 ,
GSM3408565 ,
GSM3408566 ,
GSM3408567 ,
GSM3408568 ,
GSM3408569 ,
GSM3408570 ,
GSM3408571 ,
GSM3408572 ,
GSM3408573 ,
GSM3408574 ,
GSM3408575 ,
GSM3408576 ,
GSM3408577 ,
GSM3408578 ,
GSM3408579 ,
GSM3408580 ,
GSM3408581 ,
GSM3408582 ,
GSM3408583 ,
GSM3408584 ,
GSM3408585 ,
GSM3408586 ,
GSM3408587 ,
GSM3408588 ,
GSM3408589 ,
GSM3408590 ,
GSM3408591 ,
GSM3408592 ,
GSM3408593 ,
GSM3408594 ,
GSM3408595 ,
GSM3408596 Series (1)
GSE120698 Littorina saxatilis Comparative Genomics Hybridization (CGH) study with NimbleGen 090824_L_saxatilis_expr_HX12
Relations Alternative to
GPL19000
Data table header descriptions ID SEQUENCE SPOT_ID Probe ID
Data table ID SEQUENCE SPOT_ID LittorinaHybrid2_c18742P00151
AAAAAAAGCTACTGTGGAATTAGACTGACCATGTCTCAACGATTCTATGTGATATAACAA
LittorinaHybrid2_c18742P00151
RANDOM00000104
AAAAAACATAAAGGCTTGTCGACTCATACGGCAACGCAGACAGTGATGCAGATACGTCAT
RANDOM00000104
LittorinaHybrid2_c18572P00179
AAAAAACATCCCCACATGGCAATCTTGACAGACAGACATCTTCATCGTGACCAAAAACAT
LittorinaHybrid2_c18572P00179
RANDOM00009380
AAAAAACTAATAGATAGAAATCGAGCGGCAATGAAGCTATAGGGTGTTGGATATACTGCA
RANDOM00009380
LittorinaHybrid2_c22304P00204
AAAAAATACGACAGCGTTGTTGCTCTGTGCGCAATGGGAATTTTTGGTATGAGTCAGTCA
LittorinaHybrid2_c22304P00204
LittorinaHybrid2_c12139P00056
AAAAAATACTAAGCTGCAAATTCACAGAGTTATCAATCCTGTCCTGCTGCTTTTTGGCGA
LittorinaHybrid2_c12139P00056
LittorinaHybrid2_c22961P00003
AAAAACAAACAAACTCGAACTCATTGTGTGTGTTTGTGGCACTGCCATGACTCTGCGTTG
LittorinaHybrid2_c22961P00003
LittorinaHybrid2_c7131P00033
AAAAACAAGCAGGCGTATATATGGCGACCGTGCAAAATACATCTTTGCACATTCTTCACA
LittorinaHybrid2_c7131P00033
LittorinaHybrid2_c14082P00181
AAAAACACGAGTCAGTGGCCATGGAAGAAGAATCATTCATGACGCAGAGTTGTTGTTTTC
LittorinaHybrid2_c14082P00181
RANDOM00001836
AAAAACACTGATAGGTACACATTTGATTACCATAGCCATCGCCCTCGACAGTGTCACATT
RANDOM00001836
LittorinaHybrid2_c18378P00124
AAAAACAGAAGTATAGCTCGGGTACTGAGTGCGTATCTTTGTTTGATGCGGTTGTGTGCA
LittorinaHybrid2_c18378P00124
LittorinaHybrid2_c18833P00328
AAAAACATACACGTTTCATCGAACACAATCCAAGCAGCATTTGTAACAACAGATCATAAC
LittorinaHybrid2_c18833P00328
LittorinaHybrid2_c9477P00119
AAAAACATGTGAAAGTGCAGTCACAGATCAGATCTTCGTTTTCAACCAAATTTTGTCATC
LittorinaHybrid2_c9477P00119
LittorinaHybrid2_c16064P00177
AAAAACCGACCTGTGTATGTCCTAGACACTGACCACATATGAACTGAACAGATCTTTGTA
LittorinaHybrid2_c16064P00177
LittorinaHybrid2_c23728P00220
AAAAACGCACACTGGATTTGCTGCCAGACGCCCACAATAACATTCAGAAGCTGCAGGGAG
LittorinaHybrid2_c23728P00220
LittorinaHybrid2_c3681P00151
AAAAACGCTTGTGCATGATCTATCAAGAATGACAACTGCCTTTCACCGGAGCTCAGAGGG
LittorinaHybrid2_c3681P00151
LittorinaHybrid2_c20774P00120
AAAAACGTACACATACATATCTGATTATTGAGAATACCTGTTCTTATCATTGTTGTGATA
LittorinaHybrid2_c20774P00120
LittorinaHybrid2_c10977P00130
AAAAACGTATCAATGGCAATGATTAAGCTGTCATTCATCTCCACGTGCAGTGTACTGTTT
LittorinaHybrid2_c10977P00130
LittorinaHybrid2_c24882P00032
AAAAACTCAACCAGCCCTATGCATACCACTGTCCTCAACTGCAGGAATCACCTGCATGCC
LittorinaHybrid2_c24882P00032
LittorinaHybrid2_c9178P00070
AAAAACTCATGACAGCAAATAGAGTCTCACACAGCACAATTACTTGGCTTCTTTACCGGA
LittorinaHybrid2_c9178P00070
139228 15968 Kbytes .Supplementary file Size Download File type/resource GPL25630_090824_L_saxatilis_expr.ndf.gz
8.0 Mb
(ftp) (http) NDF
GPL25630_090824_L_saxatilis_expr.ngd.gz
156.0 Kb
(ftp) (http) NGD
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