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Status
Public on Apr 02, 2003
Title
NCI_UniGEM2_HCC
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
Advanced Technology Center Microarray Facility (NIH/NCI/CCR/ATC)
Manufacture protocol
The array consists of 9128 wells. The gene set was based on the Incyte Human UniGem 2.0 version (Hs UniGene, Build #131, released on Feb 28, 2001) provided by Incyte Genomics, Inc. The set includes 122 Incyte EST clones; 8998 identifed with a public GenBank Accession; 8905 Unique GenBank Accessions; 8882 mapped into Hs UniGene Build #131; 8281 Unique UniGene Clusters; 1179 EST clusters; 7102 "Named" clusters.
Support
glass
Coating
aminosilane
Description
The array consists of 9128 wells. The gene set was based on the Incyte Human UniGem 2.0 version (Hs UniGene, Build #131, released on Feb 28, 2001) provided by Incyte Genomics, Inc. The set includes 122 Incyte EST clones; 8998 identifed with a public GenBank Accession; 8905 Unique GenBank Accessions; 8882 mapped into Hs UniGene Build #131; 8281 Unique UniGene Clusters; 1179 EST clusters; 7102 "Named" clusters.
Contributor(s)
Wang XW Submission date
Mar 05, 2003
Last update date
May 22, 2007
Contact name
Xin Wei Wang
E-mail(s)
xw3u@nih.gov Phone
240-760-6858
Organization name
National Cancer Institute
Department
Laboratory of Human Carcinogenesis
Lab
Liver Carcinogenesis Unit
Street address
37 Convent Drive
City
Bethesda
State/province
MD
ZIP/Postal code
20892-4255
Country
USA
Samples (103)
GSM5316 , GSM5317 , GSM5318 , GSM5319 , GSM5320 , GSM5321
GSM5322 ,
GSM5323 ,
GSM5324 ,
GSM5325 ,
GSM5326 ,
GSM5327 ,
GSM5328 ,
GSM5329 ,
GSM5330 ,
GSM5331 ,
GSM5332 ,
GSM5333 ,
GSM5334 ,
GSM5335 ,
GSM5336 ,
GSM5337 ,
GSM5338 ,
GSM5339 ,
GSM5340 ,
GSM5341 ,
GSM5342 ,
GSM5343 ,
GSM5344 ,
GSM5345 ,
GSM5346 ,
GSM5347 ,
GSM5348 ,
GSM5349 ,
GSM5350 ,
GSM5351 ,
GSM5352 ,
GSM5353 ,
GSM5354 ,
GSM5355 ,
GSM5356 ,
GSM5357 ,
GSM5358 ,
GSM5359 ,
GSM5360 ,
GSM5361 ,
GSM5362 ,
GSM5363 ,
GSM5364 ,
GSM5365 ,
GSM5366 ,
GSM5367 ,
GSM5368 ,
GSM5369 ,
GSM5370 ,
GSM5371 ,
GSM5372 ,
GSM5373 ,
GSM5374 ,
GSM5375 ,
GSM5376 ,
GSM5377 ,
GSM5378 ,
GSM5379 ,
GSM5380 ,
GSM5381 ,
GSM5382 ,
GSM5383 ,
GSM5384 ,
GSM5385 ,
GSM5386 ,
GSM5387 ,
GSM5388 ,
GSM5389 ,
GSM5390 ,
GSM5391 ,
GSM5392 ,
GSM5393 ,
GSM5394 ,
GSM5395 ,
GSM5396 ,
GSM5397 ,
GSM5398 ,
GSM5399 ,
GSM5400 ,
GSM5401 ,
GSM5402 ,
GSM17043 ,
GSM17044 ,
GSM17045 ,
GSM17046 ,
GSM17047 ,
GSM17048 ,
GSM17049 ,
GSM17050 ,
GSM17051 ,
GSM17052 ,
GSM17053 ,
GSM17054 ,
GSM17055 ,
GSM17056 ,
GSM17057 ,
GSM17058 Series (2)
GSE364 Molecular profiling of human hepatocarcinogenesis
GSE1064 TK6 and WTK1 LCLs plus NO
Data table header descriptions ID NIH mAdb plate-well identifier for clone sample
CLONE_ID Clone identifier
GENE Gene Name
UNIGENE UniGene Identifier Build #Hs.201
DESCRIPTION Gene Description
GB_ACC GENBANK ID assigned by vendor
MAP Chromosome location
SPOT_ID alternative spot identifier
Data table ID CLONE_ID GENE UNIGENE DESCRIPTION GB_ACC MAP SPOT_ID 159762
IncytePD:1330964
GRB14
411881
Growth factor receptor-bound protein 14
NM_004490 2q22-q24
159766
IncytePD:1813371
NUDT21
528834
Nudix (nucleoside diphosphate linked moiety X)-type motif 21
AA738354 16q13
159770
IncytePD:1554443
SLC9A3R2
440896
Solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
NM_004785 16p13.3
159774
IncytePD:1872936
TUBA4A
75318
Tubulin, alpha 4a
X06956 2q35
159778
IncytePD:1975552
PYGB
368157
Phosphorylase, glycogen; brain
U47025 20p11.2-p11.1
159782
IncytePD:1676050
DGCR6L
410965
DiGeorge syndrome critical region gene 6-like
AK001528 22q11
159954
IncytePD:1721304
H3F3B
180877
H3 histone, family 3B (H3.3B)
AA629425 17q25
159958
IncytePD:1818836
CALCOCO2
514920
Calcium binding and coiled-coil domain 2
AA463834 17q21.32
159962
IncytePD:1570216
protocadherin 2 (cadherin-like 2)
AF052685 159966
IncytePD:1879532
DDX21
576875
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
U41387 10q21
159970
IncytePD:1568221
SURF2
159448
Surfeit 2
AW328587 9q34.2
159974
IncytePD:1698402
CAPN1
502842
Calpain 1, (mu/I) large subunit
X04366 11q13
160146
IncytePD:1556011
MYO1D
658000
Myosin ID
N26257 17q11-q12
160150
IncytePD:1676436
SH3BGR
473847
SH3 domain binding glutamic acid-rich protein
AI422208 21q22.3
160154
IncytePD:1703326
FBXL5
643433
F-box and leucine-rich repeat protein 5
AI693931 4p15.33
160158
IncytePD:1534748
529441
CDNA FLJ37113 fis, clone BRACE2021708
AA702952 22
160162
IncytePD:2189677
FAM13C1
607594
Family with sequence similarity 13, member C1
AI580948 10q21.1
160166
IncytePD:2886607
ECM2
117060
Extracellular matrix protein 2, female organ and adipocyte specific
NM_001393 9q22.3
160338
IncytePD:1576947
SMARCC1
476179
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
AI435569 3p23-p21
160342
IncytePD:1687522
PEX11B
504284
Peroxisomal biogenesis factor 11B
NM_003846 1q21.1
9984 845 Kbytes .Supplementary data files not provided
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