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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 01, 2018 |
| Title |
Illumina NovaSeq 6000 (Canis lupus familiaris) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Canis lupus familiaris |
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| Submission date |
Nov 01, 2018 |
| Last update date |
Nov 01, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (897)
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GSM3454327, GSM3454328, GSM3454329, GSM3454330, GSM3454331, GSM3454332
GSM3454333, GSM3454334, GSM3942349, GSM3942350, GSM3942351, GSM3942352, GSM3942353, GSM3942354, GSM3942355, GSM3942356, GSM3942357, GSM3942358, GSM3942359, GSM3942360, GSM3942361, GSM3942362, GSM4175953, GSM4175954, GSM4175955, GSM4175956, GSM4175957, GSM4175958, GSM4175959, GSM4175960, GSM4175961, GSM4175962, GSM4175963, GSM4175964, GSM4175965, GSM4175966, GSM4175967, GSM4175968, GSM4498828, GSM4498829, GSM4518098, GSM4518099, GSM4518100, GSM4518101, GSM4697449, GSM4697450, GSM4697451, GSM4697452, GSM4697453, GSM4697454, GSM4697455, GSM4697456, GSM4697457, GSM4697458, GSM4697459, GSM4697460, GSM4697461, GSM4697462, GSM4697463, GSM4697464, GSM4736392, GSM4736393, GSM4736394, GSM4736395, GSM4860373, GSM4860374, GSM4860375, GSM4860376, GSM4860377, GSM4860378, GSM4860379, GSM4860380, GSM4860381, GSM4860382, GSM4860383, GSM4860384, GSM4860385, GSM4860386, GSM4860387, GSM4860388, GSM4860389, GSM4860390, GSM4860391, GSM4860392, GSM4860393, GSM4860394, GSM4860395, GSM4860396, GSM4860397, GSM4860398, GSM4860399, GSM4860400, GSM4860401, GSM4860402, GSM4860403, GSM4860404, GSM4860405, GSM4942855, GSM4942856, GSM4948354, GSM4948361, GSM4948368, GSM5090978, GSM5090979, GSM5090980, GSM5090981, GSM5090982, GSM5090983, GSM5090984, GSM5090985, GSM5090986, GSM5090987, GSM5090988, GSM5090989, GSM5090990, GSM5098925, GSM5098926, GSM5098927, GSM5098928, GSM5098929, GSM5098930, GSM5098931, GSM5098932, GSM5098933, GSM5098934, GSM5098935, GSM5098936, GSM5098937, GSM5098938, GSM5098939, GSM5098940, GSM5098941, GSM5098942, GSM5098943, GSM5098944, GSM5098945, GSM5098946, GSM5098947, GSM5098948, GSM5098949, GSM5098950, GSM5098951, GSM5098952, GSM5136371, GSM5136372, GSM5346314, GSM5346315, GSM5346316, GSM5346317, GSM5346318, GSM5346319, GSM5346320, GSM5346321, GSM5346322, GSM5346323, GSM5346324, GSM5346325, GSM5346326, GSM5346327, GSM5346328, GSM5346329, GSM5346330, GSM5346331, GSM5346332, GSM5346333, GSM5346334, GSM5346335, GSM5346336, GSM5346337, GSM5380274, GSM5380275, GSM5380276, GSM5380277, GSM5380278, GSM5380279, GSM5380280, GSM5380281, GSM5380282, GSM5380283, GSM5555588, GSM5555589, GSM5555590, GSM5555591, GSM5555592, GSM5555593, GSM5555594, GSM5555595, GSM5555596, GSM5555597, GSM5555598, GSM5555599, GSM5555600, GSM5555601, GSM5555602, GSM5555603, GSM5555604, GSM5555605, GSM5555606, GSM5555607, GSM5555608, GSM5555609, GSM5555610, GSM5555611, GSM5555612, GSM5555613, GSM5555614, GSM5555615, GSM5555616, GSM5555617, GSM5555618, GSM5555619, GSM5555620, GSM5555621, GSM5555622, GSM5555623, GSM5742807, GSM5742808, GSM5742809, GSM5742810, GSM5742811, GSM5742812, GSM5742813, GSM5742814, GSM5742815, GSM5742816, GSM5742817, GSM5742818, GSM6034580, GSM6034581, GSM6034582, GSM6034583, GSM6034612, GSM6034613, GSM6034639, GSM6034640, GSM6034641, GSM6034642, GSM6156731, GSM6156733, GSM6156735, GSM6156738, GSM6156739, GSM6156741, GSM6156743, GSM6156745, GSM6156747, GSM6156749, GSM6156751, GSM6156753, GSM6156755, GSM6156757, GSM6156760, GSM6156761, GSM6156763, GSM6156765, GSM6156767, GSM6156769, GSM6156771, GSM6156773, GSM6156775, GSM6156777, GSM6156779, GSM6156782, GSM6156783, GSM6156785, GSM6156787, GSM6156789, GSM6156791, GSM6156793, GSM6156795, GSM6156797, GSM6156799, GSM6156801, GSM6156804, GSM6156805, GSM6156807, GSM6156809, GSM6156811, GSM6156813, GSM6156815, GSM6156817, GSM6156819, GSM6156821, GSM6156823, GSM6156826, GSM6156827, GSM6156829, GSM6156831, GSM6156833, GSM6156835, GSM6156837, GSM6156839, GSM6156841, GSM6156843, GSM6156845, GSM6156848, GSM6156849, GSM6156851, GSM6156853, GSM6156855, GSM6156857, GSM6156861, GSM6156896, GSM6156898, GSM6156904, GSM6156906, GSM6156914, GSM6219595, GSM6219596, GSM6219597, GSM6219598, GSM6340038, GSM6340039, GSM6340040, GSM6340041, GSM6340042, GSM6340043, GSM6594303, GSM6594304, GSM6594305, GSM6594306, GSM6594307, GSM6594308, GSM6594309, GSM6594310, GSM6594311, GSM6594312, GSM6594313, GSM6594314, GSM6594315, GSM6594316, GSM6594317, GSM6594318, GSM6597203, GSM6597205, GSM6600314, GSM6600315, GSM6600316, GSM6600317, GSM6600318, GSM6600319, GSM6600320, GSM6600321, GSM6600322, GSM6600323, GSM6600324, GSM6600325, GSM6600326, GSM6600327, GSM6600328, GSM6600329, GSM6600330, GSM6600331, GSM6600332, GSM6600333, GSM6600334, GSM6600335, GSM6600336, GSM6600337, GSM6600338, GSM6600339, GSM6600340, GSM6600341, GSM6600342, GSM6725721, GSM6725722, GSM6725723, GSM6725724, GSM6725725, GSM6725726, GSM6725727, GSM6725728, GSM6725729, GSM6725730, GSM6725731, GSM6725732, GSM6725733, GSM6725734, GSM6725735, GSM6725736, GSM6725737, GSM6725738, GSM6725739, GSM6725740, GSM6725741, GSM6725742, GSM6725743, GSM6725744, GSM6725745, GSM6725746, GSM6725747, GSM6725748, GSM6725749, GSM6725750, GSM6725751, GSM6725752, GSM6725753, GSM6725754, GSM6742836, GSM6742837, GSM6742838, GSM6742839, GSM6742840, GSM6742841, GSM6742842, GSM6742843, GSM6896313, GSM6896314, GSM6896315, GSM6896316, GSM6916798, GSM6916799, GSM6916800, GSM6916801, GSM6916802, GSM6916803, GSM6934862, GSM6934863, GSM6934864, GSM6934865, GSM6934866, GSM6934867, GSM7030366, GSM7030367, GSM7030368, GSM7030369, GSM7030370, GSM7050908, GSM7050909, GSM7050910, GSM7050911, GSM7050912, GSM7050913, GSM7050914, GSM7050915, GSM7050916, GSM7050917, GSM7050918, GSM7050919, GSM7050920, GSM7050921, GSM7050922, GSM7050923, GSM7050924, GSM7083355, GSM7083356, GSM7083357, GSM7083358, GSM7083359, GSM7083360, GSM7083361, GSM7083362, GSM7103687, GSM7110573, GSM7110574, GSM7110575, GSM7110576, GSM7110577, GSM7110578, GSM7360735, GSM7360736, GSM7360737, GSM7360738, GSM7360739, GSM7360740, GSM7360741, GSM7360742, GSM7360743, GSM7360744, GSM7360745, GSM7360746, GSM7360747, GSM7360748, GSM7360749, GSM7360750, GSM7360751, GSM7360752, GSM7658568, GSM7658569, GSM7658570, GSM7658571, GSM7658572, GSM7658573, GSM7658574, GSM7658575, GSM7658576, GSM7658577, GSM7658578, GSM7658579, GSM7658580, GSM7658581, GSM7658582, GSM7658583, GSM7658584, GSM7658585, GSM7658586, GSM7658587, GSM7658588, GSM7658589, GSM7658590...
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| Series (53)
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| GSE122074 |
Nfat5 is involved in the hyperosmotic regulation of Tmem184b, which could be involved in ibuprofen transport in renal MDCK I cells |
| GSE134331 |
RNA-seq analysis of stimulated canine macrophage by Brucella canis |
| GSE140626 |
Paired-end RNA Sequencing on Madin-Darby Canine Kidney (G-MDCK) epithelial cells infected or not with Listeria monocytogenes |
| GSE149384 |
Genome-wide RNA-seq analysis in canine diffuse large B-cell (cDLBCL) cell lines |
| GSE149925 |
Genome-wide DNA methylation analysis using MethylCap-seq in canine diffuse large B-cell (cDLBCL) cell lines |
| GSE149926 |
Genome-wide DNA methylation and RNA-seq analyses identify genes and pathways associated with doxorubicin resistance in canine diffuse large B-cell lymphoma cell line |
| GSE155211 |
Genome-wide DNA methylation analysis using MethylCap-seq in canine high-grade B-cell lymphoma |
| GSE156664 |
Next Generation Sequencing Facilitates Quantitative Analysis of Canine Cytotoxic T Cells Transcriptome |
| GSE160124 |
Suitability of formalin-fixed paraffin-embedded tumor tissue for unbiased tumor-associated antigen identification |
| GSE162140 |
A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription [non-human Hi-C] |
| GSE162148 |
A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription |
| GSE162281 |
Segment-specific kinetics of mRNA, cRNA and vRNA during influenza infection |
| GSE167026 |
RNA-seq analysis of canine samples |
| GSE167201 |
Experimental Babesia rossi infection induces hemolytic, metabolic, and viral response pathways in the canine host |
| GSE168338 |
Signaling modality within gp130 receptor enhances tissue regeneration (Canine scRNA-seq) |
| GSE168395 |
Signaling modality within gp130 receptor enhances tissue regeneration |
| GSE175784 |
Paired-end RNA Sequencing on Madin-Darby Canine Kidney (G-MDCK) epithelial cells infected or not with Listeria monocytogenes and residing on varying stiffness substrates. |
| GSE178108 |
Effects of ACTH-induced long-term hypercortisolemia on the transcriptome of canine visceral adipose tissue |
| GSE183324 |
Canine DH-28 cells persistant infection with CDV, starving and hypoxic treatments |
| GSE191273 |
Transcriptomic profile of peripheral blood reveals potential genetic biomarkers for diagnosis of Osteoarthritis in German shepherd dogs |
| GSE200470 |
Divergent composition and transposon-silencing activity of small RNAs in mammalian oocytes |
| GSE203104 |
Integrated mapping of the dog epigenome (ChIP-seq) |
| GSE203106 |
Integrated mapping of the dog epigenome (RNA-seq) |
| GSE203107 |
Integrated mapping of the dog epigenome |
| GSE205707 |
Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss |
| GSE208269 |
Effect of podoplanin depletion on gene expressions in canine melanoma cell lines |
| GSE213788 |
Transcriptomic profiling of canine decidualization and effects evoked by antigestagens on decidualized canine uterine stromal cells |
| GSE213969 |
Friend or Foe? Primary Tumor represses distant metastases' growth via exosomal miRNA-1 |
| GSE214154 |
RNA-seq analysis of canine soft tissue sarcomas. |
| GSE217750 |
Mitral valve transcriptome analysis in thirty-four age-matched Cavalier King Charles Spaniels with or without congestive heart failure caused by myxomatous mitral valve disease |
| GSE218355 |
Canine peripheral blood TCRαβ T cell atlas: Identification of diverse subsets including CD8+ MAIT-like cells by combined single-cell transcriptome and V(D)J repertoire analysis |
| GSE222161 |
Transcriptomic and Metabolomic Changes Reveals the Immunomodulatory Function of Casein Phosphopeptide-Selenium Chelate in Beagle Dogs |
| GSE222898 |
Effect of Cold Atmospheric Microwave Plasma (CAMP) on wound healing in canine keratinocytes |
| GSE224723 |
Single-cell RNA sequencing of canine meningiomas |
| GSE225599 |
A single-cell RNA sequencing atlas of circulating leukocytes from healthy and osteosarcoma affected dogs |
| GSE226767 |
Direct Comparison of Canine and Immune Responses Using Transcriptomic and Functional Analyses |
| GSE227592 |
ADAR1 biology can hinder effective antiviral RNA interference |
| GSE227906 |
Tissue confinement regulates cell growth and size in epithelia |
| GSE232642 |
Altered Chromatin State Drives Hypersocial Behaviors in Canids |
| GSE235998 |
Notch3 drives meningioma tumorigenesis and resistance to radiotherapy |
| GSE238110 |
Transcriptional profiling of canine osteosarcoma identifies of prognostic gene expression signatures with translational value for humans. |
| GSE239948 |
CCOGC canine Osteosarcoma tumor samples |
| GSE240893 |
miRNome Expression Analysis in Canine Diffuse Large B-Cell Lymphoma |
| GSE244116 |
Single-Nuclei Multiome (ATAC + Gene Expression) Sequencing of a Primary Canine Osteosarcoma Elucidates Intra-Tumoral Heterogeneity and Characterizes the Tumor Microenvironment |
| GSE252470 |
Single-cell RNA sequencing reveals the cellular and molecular heterogeneity of treatment-naïve primary osteosarcoma in dogs |
| GSE254005 |
Single-Cell RNA Sequencing Investigation of the Duodenal Mucosa in Canine Chronic Inflammatory Enteropathy and Health |
| GSE256461 |
miR-182, miR-221 and miR-222 are potential urinary extracellular vesicle biomarkers for canine urothelial carcinoma |
| GSE256514 |
Divergent composition and transposon-silencing activity of small RNAs in mammalian oocytes II |
| GSE263280 |
Single-nuclei expression of canine veins during carotid-cartoid vein bypass implantation |
| GSE263281 |
Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation |
| GSE266234 |
Stromal expression profiling reveals immune-driven adaption to malignancy in canine melanoma subtypes |
| GSE266585 |
Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix |
| GSE267624 |
Establishment and characterization of six canine hepatocellular carcinoma cell lines (Transcriptional changes induced by drug treatment with toceranib or sorafenib) |
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| Supplementary data files not provided |
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