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Platform GPL26641 Query DataSets for GPL26641
Status Public on Apr 01, 2020
Title Agilent-020717 Fusarium graminearum 4x44k
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Fusarium graminearum
Manufacturer Agilent Technologies
Manufacture protocol SurePrint technology: Custom commercial microarrays are manufactured using a non-contact industrial inkjet printing process, in which oligo monomers are deposited uniformly onto specially-prepared glass slides. This in situ synthesis process prints 60-mer length oligonucleotide probes, base-by-base, from digital sequence files. The precise inkjet process enables the delivery of extremely small, accurate volumes (picoliters) of the chemicals to be spotted. Standard phosphoramidite chemistry used in the reactions allows for very high coupling efficiencies to be maintained at each step in the synthesis of the full-length oligonucleotide. Precise quantities are reproducibly deposited “on the fly” and is achieved without stopping, to make contact with the slide surface and without introducing surface-contact feature anomalies.
 
 
Submission date May 08, 2019
Last update date Apr 01, 2020
Contact name Linda J Harris
E-mail(s) Linda.Harris@agr.gc.ca
Phone 613-759-1314
Organization name Agriculture & Agri-Food Canada (AAFC)
Department Eastern Cereal & Oilseed Research Centre
Lab Building #21
Street address 960 Carling Ave.
City Ottawa
State/province Ontario
ZIP/Postal code K1A 0C6
Country Canada
 
Relations
Alternative to GPL11046

Data table header descriptions
ID
SEQUENCE
ORF
DESCRIPTION
SPOT_ID

Data table
ID SEQUENCE ORF DESCRIPTION SPOT_ID
(-)3xSLv1 CONTROL
(+)E1A_r60_1 CONTROL
(+)E1A_r60_3 CONTROL
(+)E1A_r60_a104 CONTROL
(+)E1A_r60_a107 CONTROL
(+)E1A_r60_a135 CONTROL
(+)E1A_r60_a20 CONTROL
(+)E1A_r60_a22 CONTROL
(+)E1A_r60_a97 CONTROL
(+)E1A_r60_n11 CONTROL
(+)E1A_r60_n9 CONTROL
(+)eQC-39 CONTROL
(+)eQC-40 CONTROL
(+)eQC-41 CONTROL
(+)eQC-42 CONTROL
CUST_1_PI390790352 ATTGCCGTTGCCATCTTGATCTTTTGCATCTTTGACCCCGCAATTCTTCTAGACTACCAG FGSG_0211 "9 related to YER185w, Rta1p"
CUST_10_PI390790352 TACGACCTCAAGACAAAATGGTCTCGTACTCGGTGATTGGAAATCTCAAGGGTTCAGAGT FGSG_02115 related to TRI7 - trichothecene biosynthesis gene cluster
CUST_100_PI390790352 GAAGCCGTCATGACTGATGTAACCCGAGCTATCTCTCAATCAATGATTCAATTTAACTGA FGSG_15286 hypothetical protein
CUST_1000_PI390790352 TTCATCTTCCTTCTCTCTACTCGTGCTGGTGGTCTTGGTATCAATCTTACAACTGCTGAC FGSG_02026 related to DNA-dependent ATPase DOMINO B
CUST_10000_PI390790352 TCGGACGAATTGGGAATGAAAATACTAGCACTCATGAAGTATCTGTTTCGAGCTTTGCAG FGSG_13894 hypothetical protein

Total number of rows: 41448

Table truncated, full table size 5222 Kbytes.




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Supplementary data files not provided

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