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Platform GPL30655 Query DataSets for GPL30655
Status Public on Sep 23, 2021
Title nCounter PanCancer Progression panel [NS_CancerProg_C4972]
Technology type other
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NanoString Technologies Inc.
Manufacture protocol NanoString nCounter gene expression assay protocol was followed (https://www.nanostring.com/wp-content/uploads/2021/03/MAN-10056-05-Gene-Expression-Hybridization-Protocol.pdf).
 
 
Submission date Sep 20, 2021
Last update date Sep 23, 2021
Contact name Georg Thomas Wondrak
E-mail(s) wondrak@arizona.edu
Organization name University of Arizona
Department Pharm/Tox
Street address UA Cancer Center, 1515 N Campbell Ave, Room 3971
City Tucson
State/province Arizona
ZIP/Postal code 85724
Country USA
 
Samples (63) GSM5593922, GSM5593923, GSM5593924, GSM5593925, GSM5593926, GSM5593927 
Series (3)
GSE184633 Gene expression profiling of isogenic malignant melanoma A375-BRAFV600E/NRASQ61 and A375-BRAFV600E/NRASQ61K cell lines
GSE253980 Molecular signature of metastatic cutaneous squamous cell carcinomas: a case-control study
GSE262543 Melanotransferrin (MELTF, MFI2, CD228) expression attenuates malignant melanoma progression in the A375-luc2 murine metastasis model and human patients

Data table header descriptions
ID
Accession
GB_ACC GenBank Accession number
CodeClass
SPOT_ID

Data table
ID Accession GB_ACC CodeClass SPOT_ID
LDHA NM_001165414.1 NM_001165414.1 Endogenous
CADM1 NM_014333.3 NM_014333.3 Endogenous
VIT NM_053276.3 NM_053276.3 Endogenous
ITGB6 NM_000888.3 NM_000888.3 Endogenous
HMOX1 NM_002133.2 NM_002133.2 Endogenous
SOX17 NM_022454.3 NM_022454.3 Endogenous
TCF4 NM_003199.1 NM_003199.1 Endogenous
MTOR NM_004958.2 NM_004958.2 Endogenous
NCAM1 NM_000615.5 NM_000615.5 Endogenous
FIGF NM_004469.2 NM_004469.2 Endogenous
ADD1 NM_001119.4 NM_001119.4 Endogenous
TP53 NM_000546.2 NM_000546.2 Endogenous
TJP2 NM_004817.2 NM_004817.2 Endogenous
SFRP1 NM_003012.3 NM_003012.3 Endogenous
PTK6 NM_005975.2 NM_005975.2 Endogenous
KRIT1 NM_004912.3 NM_004912.3 Endogenous
FMOD NM_002023.3 NM_002023.3 Endogenous
NID2 NM_007361.3 NM_007361.3 Endogenous
TIMP2 NM_003255.4 NM_003255.4 Endogenous
CXCL17 NM_198477.1 NM_198477.1 Endogenous

Total number of rows: 784

Table truncated, full table size 32 Kbytes.




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