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Platform GPL32266 Query DataSets for GPL32266
Status Public on May 23, 2023
Title GMAP-UTS520601 array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's website
 
 
Submission date May 18, 2022
Last update date May 18, 2022
Contact name Franco J Vizeacoumar
E-mail(s) franco.vizeacoumar@usask.ca
Phone 306-966-7010
Organization name University of Saskatchewan
Department Oncology
Lab Vizeacoumar Lab
Street address 4D40 Health Sciences Building, 107 Wiggins Road
City Saskatoon
State/province Saskatchewan
ZIP/Postal code S7N 5E5
Country Canada
 
Samples (8) GSM6267529, GSM6267530, GSM6267531, GSM6267532, GSM6267533, GSM6267534 
Series (1)
GSE206981 Integration of cancer-related genetic landscape of Eph receptors and ephrins with proteomics identifies a crosstalk between EPHB6 and EGFR

Data table header descriptions
ID CLONE_ID
TRPS_ID
SEQUENCE
HUMAN54K
HUMAN80K
HUMAN80K_SUBPOOL
MOUSE80K
MOUSE80K_SUBPOOL
CLONE_NAME
REGION
REFSEQ
GENE_ID
GENE_SYMBOL
GENE_NAME
probe.id

Data table
ID TRPS_ID SEQUENCE HUMAN54K HUMAN80K HUMAN80K_SUBPOOL MOUSE80K MOUSE80K_SUBPOOL CLONE_NAME REGION REFSEQ GENE_ID GENE_SYMBOL GENE_NAME probe.id
TRCN0000000001 TRPS0000194688 CCCTGCCAAACAAGCTAATAT Y Y 1 N 0 NM_001356.x-2866s1c1 3UTR NM_001356 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 914578
TRCN0000000002 TRPS0000082764 CGGAGTGATTACGATGGCATT Y Y 1 N 0 NM_001356.x-1157s1c1 CDS NM_001356 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 347728
TRCN0000000003 TRPS0000094998 CGTAGAATAGTCGAACAAGAT Y Y 1 N 0 NM_001356.x-1940s1c1 CDS NM_001356 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 991334
TRCN0000000004 TRPS0000054161 CGCTTGGAACAGGAACTCTTT Y Y 1 N 0 NM_001356.x-1289s1c1 CDS NM_001356 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 620674
TRCN0000000005 TRPS0000003336 AGCAGATTTAGTGGAGGGTTT Y Y 1 N 0 NM_001356.x-2627s1c1 CDS NM_001356 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 850824
TRCN0000000006 TRPS0000243593 GTTGGTTCGATAATGGCCTTT Y Y 1 N 0 NM_001358.x-2632s1c1 3UTR NM_001358 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 880126
TRCN0000000007 TRPS0000011035 ACTGTTCTAATGAGGTCCTAT Y Y 1 N 0 NM_001358.x-1906s1c1 CDS NM_001358 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 227923
TRCN0000000008 TRPS0000022221 TGGGAATACAAGGATAGGTTT Y Y 1 N 0 NM_001358.x-579s1c1 CDS NM_001358 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 743525
TRCN0000000009 TRPS0000038359 TGTAAGAGAATAAAGCGTGAA Y Y 1 N 0 NM_001358.x-1257s1c1 CDS NM_001358 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 53772
TRCN0000000010 TRPS0000263791 GCTTCAACAAATGCTATGCTT Y Y 1 N 0 NM_001358.x-348s1c1 CDS NM_001358 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 560803
TRCN0000000011 TRPS0000121307 CCAAGGGTAGGTGTCTCATTT Y Y 1 N 0 NM_003089.x-1582s1c1 3UTR NM_003089 6625 SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 199621
TRCN0000000012 TRPS0000030715 TCCGCTTACAAACACGCAGAT Y Y 1 N 0 NM_003089.x-646s1c1 CDS NM_003089 6625 SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 57852
TRCN0000000013 TRPS0000375555 GCGCCGTACATTCGAGAGTTT Y Y 1 N 0 NM_003089.x-295s1c1 CDS NM_003089 6625 SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 318336
TRCN0000000014 TRPS0000117045 CCGGAGAGAGTTTGAGGTGTA Y Y 1 N 0 NM_003089.x-528s1c1 CDS NM_003089 6625 SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 972473
TRCN0000000015 TRPS0000251863 GACATGCACTCCGCTTACAAA Y Y 1 N 0 NM_003089.x-637s1c1 CDS NM_003089 6625 SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 339239
TRCN0000000016 TRPS0000310201 GATCTGTGTATGGTGTGTTAA Y Y 1 N 0 NM_003675.x-1102s1c1 3UTR NM_003675 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 347872
TRCN0000000017 TRPS0000255646 GAGGAGAACCAATCAGACTAT Y Y 1 N 0 NM_003675.x-344s1c1 CDS NM_003675 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 425333
TRCN0000000018 TRPS0000317610 GACTATTTGGAGAGACTGATT Y Y 1 N 0 NM_003675.x-359s1c1 CDS NM_003675 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 47574
TRCN0000000019 TRPS0000246908 GAATACGTGAAGGCAAATGAT Y Y 1 N 0 NM_003675.x-853s1c1 CDS NM_003675 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 830887
TRCN0000000020 TRPS0000349538 GCCAGCAGTATTCTTCAGTAA Y Y 1 N 0 NM_004660.x-4242s1c1 3UTR NM_004660 8653 DDX3Y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked 95738

Total number of rows: 238748

Table truncated, full table size 35796 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL32266_GMAP-Uts520601.clf.gz 6.9 Mb (ftp)(http) CLF
GPL32266_GMAP-Uts520601.pgf.gz 12.8 Mb (ftp)(http) PGF

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