 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Mar 07, 2023 |
| Title |
NanoString GeoMx DSP |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
NanoString |
| Manufacture protocol |
NanoString GeoMx DSP
|
| |
|
| Description |
Spatial Proteomics - Barcode readout counts
|
| |
|
| Submission date |
Jan 16, 2023 |
| Last update date |
Jan 16, 2023 |
| Contact name |
Ana Karina de Olliiveirra |
| E-mail(s) |
ankaoliv@gmail.com
|
| Phone |
434-924-1753
|
| Organization name |
UVA
|
| Department |
Department of Pathology
|
| Lab |
Spatial Biology Core
|
| Street address |
1340 Jefferson Park Avenue
|
| City |
Charlottesville |
| State/province |
VA |
| ZIP/Postal code |
22908 |
| Country |
USA |
| |
|
| Samples (63)
|
GSM6936379, GSM6936380, GSM6936381, GSM6936382, GSM6936383, GSM6936384
GSM6936385, GSM6936386, GSM6936387, GSM6936388, GSM6936389, GSM6936390, GSM6936391, GSM6936392, GSM6936393, GSM6936394, GSM6936395, GSM6936396, GSM6936397, GSM6936398, GSM6936399, GSM6936400, GSM6936401, GSM6936402, GSM6936403, GSM6936404, GSM6936405, GSM6936406, GSM6936407, GSM6936408, GSM6936409, GSM6936410, GSM6936411, GSM6936412, GSM6936413, GSM6936414, GSM6936415, GSM6936416, GSM6936417, GSM6936418, GSM6936419, GSM6936420, GSM6936421, GSM6936422, GSM6936423, GSM6936424, GSM6936425, GSM6936426, GSM6936427, GSM6936428, GSM6936429, GSM6936430, GSM6936431, GSM6936432, GSM6936433, GSM6936434, GSM6936435, GSM6936436, GSM6936437, GSM6936438, GSM6936439, GSM6936440, GSM6936441
|
| Series (1) |
| GSE222977 |
Mapping the immune cell microenvironment by digital spatial profiling in muscle tissue injected with the venom of Daboia russelii |
|
| Data table header descriptions |
| ID |
|
| Segment display name |
|
| Analyte type |
|
| CodeClass |
|
| SPOT_ID |
|
| Data table |
| ID |
Segment display name |
Analyte type |
CodeClass |
SPOT_ID |
| CD11b |
Myeloid;DC;All Targets |
Protein |
Endogenous |
CD11b |
| CD4 |
Th cells;T cells;All Targets |
Protein |
Endogenous |
CD4 |
| CD8a |
CD8 T cells;T cells;All Targets |
Protein |
Endogenous |
CD8a |
| CD45 |
Total Immune;All Targets |
Protein |
Endogenous |
CD45 |
| Histone H3 |
Housekeepers;All Targets |
Protein |
Control |
Histone H3 |
| PanCk |
Tumor;Epithelial;All Targets |
Protein |
Endogenous |
PanCk |
| GZMB |
T cell Activation;Cytotoxicity;All Targets |
Protein |
Endogenous |
GZMB |
| PD-L1 |
Checkpoint;Myeloid Activation;All Targets |
Protein |
Endogenous |
PD-L1 |
| Rb IgG |
Background;All Targets |
Protein |
Negative |
Rb IgG |
| Fibronectin |
Stroma;Fibroblasts;All Targets |
Protein |
Endogenous |
Fibronectin |
| MHC II |
Antigen Presentation;MHC2;All Targets |
Protein |
Endogenous |
MHC II |
| S6 |
Housekeepers;All Targets |
Protein |
Control |
S6 |
| SMA |
Stroma;All Targets |
Protein |
Endogenous |
SMA |
| Rt IgG2b |
Background;All Targets |
Protein |
Negative |
Rt IgG2b |
| Rt IgG2a |
Background;All Targets |
Protein |
Negative |
Rt IgG2a |
| Ki-67 |
Proliferation;All Targets |
Protein |
Endogenous |
Ki-67 |
| CD11c |
Myeloid;DC;All Targets |
Protein |
Endogenous |
CD11c |
| CD3e |
T cells;All Targets |
Protein |
Endogenous |
CD3e |
| CTLA4 |
T cell Activation;Th cells;Checkpoint;T cells;All Targets |
Protein |
Endogenous |
CTLA4 |
| F4/80 |
Myeloid;Macrophage;All Targets |
Protein |
Endogenous |
F4/80 |
Total number of rows: 47
Table truncated, full table size 2 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...