|
Status |
Public on May 10, 2004 |
Title |
STv3_MMCC |
Technology type |
spotted DNA/cDNA |
Distribution |
custom-commercial |
Organism |
Salmonella enterica |
|
|
Description |
Custom made Salmonella array
|
|
|
Contributor(s) |
Porwollik S, Frye JG, McClelland M, Eckhardt C, Blackmer F |
Submission date |
May 29, 2003 |
Last update date |
May 26, 2005 |
Contact name |
Michael McClelland |
E-mail(s) |
mcclelland.michael@gmail.com
|
Phone |
858-336-9554
|
Organization name |
University of California, Irvine
|
Department |
Microbiology & Molecular Genetics
|
Street address |
132 Med Surge I
|
City |
Irvine |
State/province |
CA |
ZIP/Postal code |
92697 |
Country |
USA |
|
|
Samples (126)
|
GSM9554, GSM9555, GSM9556, GSM9557, GSM9558, GSM9559
GSM9560, GSM9561, GSM9562, GSM9563, GSM9564, GSM9565, GSM9566, GSM9567, GSM9568, GSM10063, GSM10064, GSM10065, GSM11700, GSM11701, GSM11702, GSM11907, GSM11908, GSM11909, GSM11911, GSM11912, GSM11913, GSM11914, GSM11915, GSM11916, GSM11917, GSM11918, GSM11919, GSM11920, GSM11921, GSM11922, GSM11923, GSM11924, GSM11925, GSM11926, GSM11927, GSM11928, GSM11929, GSM11930, GSM11931, GSM11932, GSM11933, GSM11934, GSM11935, GSM11936, GSM11937, GSM11938, GSM11939, GSM11940, GSM11941, GSM11942, GSM11943, GSM11944, GSM11945, GSM11946, GSM11948, GSM11949, GSM11950, GSM11951, GSM11952, GSM11953, GSM12037, GSM12038, GSM12039, GSM12040, GSM12041, GSM12042, GSM12043, GSM12044, GSM12045, GSM12046, GSM12047, GSM12048, GSM12049, GSM12050, GSM12051, GSM12055, GSM12056, GSM12057, GSM12063, GSM12064, GSM12065, GSM12070, GSM12071, GSM12072, GSM12080, GSM12081, GSM12082, GSM12084, GSM12085, GSM12086, GSM12088, GSM12089, GSM12090, GSM12091, GSM12092, GSM12093, GSM12095, GSM12096, GSM12097, GSM12102, GSM12103, GSM12104, GSM12396, GSM12397, GSM12398, GSM12400, GSM12401, GSM12402, GSM12403, GSM12404, GSM12405, GSM12406, GSM12407, GSM12408, GSM12425, GSM12426, GSM12427, GSM18488, GSM18489, GSM18490
|
Series (6)
|
GSE622 |
LT2_MitomycinC_2ug/ml_RNA |
GSE624 |
LT2_hydrogen_peroxide_2mM_DNA |
GSE806 |
LT2_hydrogen_peroxide_2mM_RNA |
GSE807 |
SL1344_heat_shock_37C_RNA |
GSE808 |
SL1344_heat_shock_42C_RNA |
GSE1035 |
Genomic comparisons of Salmonella enterica sspI strains |
|
Data table header descriptions |
ID |
|
ARRAY_ROW |
subarray row |
ARRAY_COLUMN |
subarray column |
ROW |
spot row |
COLUMN |
spot column |
NEW_CHIP_ID |
CHIP# as of 020901 |
OLD_CHIP_ID |
previous CHIP# |
SEQUENCE |
amplified sequence |
PRIMARY_CT18_GENE |
first STY CT18 gene represented (>97%ID over 100bp & >90% over entire fragment) |
SECONDARY_CT18_GENES |
further CT18 genes represented (>97%ID over 100bp & >90% over entire fragment) |
SINGLE_CRITERIUM_CT18_GENES |
more CT18 genes represented (>97%ID over 100bp OR >90% over entire fragment) |
BEST_CT18_GENE |
best represented STY# |
CT18_GENE_NAME |
best represented gene name in STY CT18 |
PRIMARY_LT2_GENE |
first STM LT2 gene represented (>97%ID over 100bp & >90% over entire fragment) |
SECONDARY_LT2_GENES |
further LT2 genes represented (>97%ID over 100bp & >90% over entire fragment) |
SINGLE_CRITERIUM_LT2_GENES |
more LT2 genes represented (>97%ID over 100bp & >90% over entire fragment) |
BEST_LT2_GENE |
best represented STM# |
LT2_GENE_NAME |
best represented gene name in STM LT2 |