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Platform GPL33450 Query DataSets for GPL33450
Status Public on Dec 05, 2023
Title Universal PBM 8x60k (Bulyk lab design)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism synthetic construct
Manufacturer Agilent Technologies
Manufacture protocol In situ oligosynthesized array with synthetic sequences that cover all possible 10-mers (Berger et al., Nature Biotechnology 2006). AMADID #030236
 
 
Submission date May 31, 2023
Last update date Dec 06, 2023
Contact name Stephen Gisselbrecht
E-mail(s) steveg@alum.mit.edu
Phone 857-540-2853
Organization name Brigham and Women's Hospital
Department Division of Genetics, Department of Medicine
Lab Martha L. Bulyk
Street address 77 Avenue Louis Pasteur, Rm 468
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Samples (122) GSM7437420, GSM7437421, GSM7437422, GSM7437423, GSM7437424, GSM7437425 
Series (1)
GSE233827 DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues

Data table header descriptions
ID
SEQUENCE 8-mer for which affinityEstimate values are shown in subsequent columns

Data table
ID SEQUENCE
1 AAAAAAAA
2 AAAAAAAC
3 AAAAAAAG
4 AAAAAAAT
5 AAAAAACA
6 AAAAAACC
7 AAAAAACG
8 AAAAAACT
9 AAAAAAGA
10 AAAAAAGC
11 AAAAAAGG
12 AAAAAAGT
13 AAAAAATA
14 AAAAAATC
15 AAAAAATG
16 AAAAAATT
17 AAAAACAA
18 AAAAACAC
19 AAAAACAG
20 AAAAACAT

Total number of rows: 32896

Table truncated, full table size 471 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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