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Platform GPL4518 Query DataSets for GPL4518
Status Public on Nov 08, 2006
Title UFZ/Cell Toxicology_Danio rerio_14k
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Danio rerio
Manufacturer MWG Biotech AG, Ebersbach, Germany/ Leiden Genome Technology Centre, Leiden, The Netherlands
Manufacture protocol The MWG zebrafish 14k array oligo set (MWG Biotech AG, Ebersbach, Germany) consists of 14067 zebrafish specific genes based on the NCBI Genbank release 128.0. Every gene is represented by one oligonucleotide. 173 Arabidopsis genes serve as negative controls. Spotting of the oligo set on poly-L-lysine-cotted glass slides was performed by the Leiden Genome Technology Centre (University of Leiden, NL, for details see Meijer et al., 2005).
Support glass
Coating polysine
 
 
Contributor(s) Voelker D, Vess C, Otto GW, Geisler R, Schirmer K, Scholz S
Submission date Nov 03, 2006
Last update date Nov 08, 2006
Contact name Doris Voelker
E-mail(s) doris.voelker@ufz.de
Phone 0049(341)235-2928
Fax 0049(341)235-2434
URL http://www.ufz.de
Organization name UFZ Centre for Environmental Research Leipzig-Halle
Department Cell Toxicology
Street address Permoser Str. 15
City Leipzig
ZIP/Postal code 04318
Country Germany
 
Samples (6) GSM143619, GSM143620, GSM143624, GSM143625, GSM143627, GSM143628
Series (1)
GSE6228 Gene expression profiling in zebrafish embryos exposed to 3,4-dichloroaniline (3,4-DCA)

Data table header descriptions
ID
GB_ACC GenBank Accession number
Row array row number
Column array coloumn number
SPOT_ID spot identifier; controls and framefinder

Data table
ID GB_ACC Row Column SPOT_ID
1 NM_131005 1 1
2 NM_131651 1 2
3 AF281479 1 3
4 AL591405 1 4
5 AF076918 1 5
6 AL591391 1 6
7 AF108819 1 7
8 NM_131154 1 8
9 AI354209 1 9
10 AW153587 1 10
11 BM183600 1 11
12 AI332174 1 12
13 1 13 DRFRAMEFINDER00684
14 BI473097 1 14
15 BG304121 1 15
16 AI959196 1 16
17 BM403230 1 17
18 AW420068 1 18
19 AF012759 1 19
20 AF246171 1 20

Total number of rows: 15552

Table truncated, full table size 350 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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