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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 01, 2007 |
| Title |
Agilent Custom Mouse 44K Alternative Splicing Oligo Microarray |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
Agilent |
| Manufacture protocol |
60-mer ink-jet Agilent microarray
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| Description |
A microarray platform to profile alternative splicing levels for 3707 cassette-type alternative exons across a diverse spectrum of mouse tissues.
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| Contributor(s) |
Fagnani M, Barash Y, Ip J, Misquitta C, Pan Q, Saltzman AL, Shai O, Lee L, Rozenhek A, Mohammad N, Willaime-Morawek S, Babak T, Zhang W, Hughes TR, van der Kooy D, Frey BJ, Blencowe BJ |
| Submission date |
Jun 08, 2007 |
| Last update date |
Aug 01, 2007 |
| Contact name |
Qun Pan |
| E-mail(s) |
qun.pan@utoronto.ca
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| Organization name |
University of Toronto
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| Street address |
160 College St.
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| City |
Toronto |
| ZIP/Postal code |
M5S 3E1 |
| Country |
Canada |
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| Samples (27)
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GSM199480, GSM200614, GSM200615, GSM200616, GSM200617, GSM200618
GSM200620, GSM200621, GSM200622, GSM200623, GSM200624, GSM200625, GSM200626, GSM200627, GSM200629, GSM200630, GSM200631, GSM200633, GSM200634, GSM200635, GSM200636, GSM200638, GSM200639, GSM200640, GSM200642, GSM200643, GSM200644
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| Series (1) |
| GSE8081 |
Functional coordination of alternative splicing in the mammalian central nervous system |
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| Data table header descriptions |
| ID |
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| GB_ACC |
Genbank Accession |
| SEQUENCE |
Oligo Sequence |
| Data table |
| ID |
GB_ACC |
SEQUENCE |
| 10368-01102HC1 |
BC020026 |
aaaatgacaacggtcagcggctttcggttggacgcttttttttttttt |
| 10368-01103LC1 |
BC011464 |
ccagtgtgatgtgcccaggcgtcgtgatgaccaatattttttttttttt |
| 10368-01104HC1 |
BC017547 |
ggggacacttcatagatgagaatggctctcgcctccctttttttttttt |
| 10368-01105LC1 |
BC017547 |
ctaccagagcactatgaatgtcaatgacctcaaacaaaggctgttttttttttttt |
| 10368-01106HC1 |
U51629 |
ctgtcgcagccattgttattatcctagtatccttggtctatctcaatttttttttttt |
| 10368-01109LC1 |
M79361 |
catgaagctgctcgcaatggtcgcactgcttttttttttttt |
| 10368-0110HC1 |
BY724666 |
ctcacagcagttccgatgttgctctttcctcaagttgctttttttttttt |
| 10368-01114LC1 |
AK011148 |
ccggccttctgagcctttctactctgatgacaagatgtttttttttttt |
| 10368-01115LC1 |
AI664602 |
gaaattgcagtccctgagctggacgggaagacagcatttttttttttt |
| 10368-01117LC1 |
M84412 |
gatattttctcccattctttggattcctctcctcttcctactcatggtttttttttttt |
| 10368-01118HC1 |
AK016183 |
gcatcctatacatcctgtgcttctcagcagtgctcatctttttttttttt |
| 10368-01119HC1 |
NM_013489 |
cagcgccatctgtggatctggttcctttgcctacaaatttttttttttt |
| 10368-01124LC1 |
BC023704 |
ggtgagcggtagtgactgcgggcacatcttccttttttttttttt |
| 10368-01126HC1 |
BY271826 |
cgcccggcggggccaatctttcccaggacgtttttttttttt |
| 10368-0112HC1 |
AK122330 |
tgtgaacgccatgagagtcttgagtaccagcactgacctttttttttttt |
| 10368-01131LC1 |
AK002379 |
gcaagtccagtatgcgatggtgagaataaaagccgccatttttttttttt |
| 10368-01133LC1 |
BC014683 |
agtttgaaagacttccaacgcgcagcgatgtgcttttttttttttt |
| 10368-01134LC1 |
BC006671 |
aagaagtacaaaggacaggcagtggctgtggatacctactgttttttttttttt |
| 10368-01136LC1 |
AK051683 |
ggcagacagaaagactggaaaaggagcttgcctctcatttttttttttt |
| 10368-01137LC1 |
AK004877 |
tatatacccgactttggaaatagacattgaaggtgaattacagcaactcaagtttttttt |
Total number of rows: 22242
Table truncated, full table size 1648 Kbytes.
| Supplementary data files not provided |
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