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Platform GPL5826 Query DataSets for GPL5826
Status Public on Sep 16, 2007
Title DASL Human Cancer Panel by Probe
Technology type oligonucleotide beads
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol http://www.illumina.com/pages.ilmn?ID=5
Catalog number DA-10-100
 
Description DASL Human Cancer Panel by Gene may be viewed at GPL5858.

The GPL5826.dap file (linked as a Supplementary file at the foot of the record) is required by BeadStudio for processing Illumina image files.
 
Web link http://www.illumina.com/downloads/DASLvsDirectHyb.pdf
Contributor(s) Kollmeyer TM, Jenkins RB
Submission date Sep 10, 2007
Last update date Oct 03, 2007
Contact name Robert B. Jenkins
E-mail(s) rjenkins@mayo.edu
Organization name Mayo Clinic
Department Laboratory Medicine and Pathology
Street address 200 First Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Samples (330) GSM620935, GSM620936, GSM620937, GSM620938, GSM620939, GSM620940 
Series (6)
GSE25231 Expression Profiling of Formalin-Fixed Parafin-Embedded Primary Breast Tumors DASL Cancer Panel
GSE25234 Expression Profiling of Formalin-Fixed Parafin-Embedded Primary Breast Tumors
GSE38057 A 13-gene signature predicting rapid development of brain metastases in breast cancer

Data table header descriptions
ID target ID
SequenceSource source of the target sequence accession
GB_ACC RefSeq identifier
SEQUENCE probe sequence

Data table
ID SequenceSource GB_ACC SEQUENCE
GI_10092618-S-1 RefSeq NM_020529.1 AGATGCTGCCAGAGAGTGAGGATGAGGAGAGCTATGACACAGAGT
GI_10092618-S-2 RefSeq NM_020529.1 TGACTGTGTGTTTGGAGGCCAGCGTCTGACGTTATGAGTGCAAAG
GI_10092618-S-3 RefSeq NM_020529.1 CGTTCAGTGATGTGGGGTGAAAAGTTACTACCTGTCAAGGTTTGTG
GI_10337586-S-1 RefSeq NM_020996.1 GTTCAGAGAAACCCTCCTGCCCAACAATTACAATGCCTACGAGTC
GI_10337586-S-2 RefSeq NM_020996.1 AGGCAAGGTGGATGGCCCTGGGACAGAAACTGTTCATCACTA
GI_10337586-S-3 RefSeq NM_020996.1 GACTGTCACTCATTTCCTTCCCAGGATCTAAGGACCCACAAAAGAAG
GI_10834981-S-1 RefSeq NM_000599.1 CAACGCCATCTCCACTGCATCCGATCTCATTATTTCGGTGGTT
GI_10834981-S-2 RefSeq NM_000599.1 ACCCCAGGACGCCACTCATTTCATCTCATTTAAGGGAAAAATAT
GI_10834981-S-6 RefSeq NM_000599.1 GCTGGCAGCTGAGGGTTAGAAAGCGGGGTGTATTTTAGATTTTAAG
GI_10834983-S-1 RefSeq NM_000600.1 TGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGATG
GI_10834983-S-2 RefSeq NM_000600.1 TGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTC
GI_10834983-S-4 RefSeq NM_000600.1 TCTGGTCAGAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCT
GI_10835001-S-1 RefSeq NM_001175.1 CTTTTGTGGTTGTTGCTGGCCCAATGAGTCCCTAGTCACATCC
GI_10835001-S-2 RefSeq NM_001175.1 ATCAGGGCCAGATCTTCCACGTCTCCATCTCAGTACACAATCATT
GI_10835001-S-4 RefSeq NM_001175.1 AGAGGCCAGAAAATGGGCAAATTATCACTAACAGGTCTTTGACTCA
GI_10835048-S-1 RefSeq NM_001664.1 GAGATATGGCAAACAGGATTGGCGCTTTTGGGTACATGGAGTGTT
GI_10835048-S-5 RefSeq NM_001664.1 CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
GI_10835048-S-6 RefSeq NM_001664.1 GGCAATTAGACACTTTGGAAGATGGCATAACCTGTCTCACCTGGACTTA
GI_10835156-S-1 RefSeq NM_000597.1 GTGGTGGGTGCTGGAGGATTTTCCAGTTCTGACACACGTATTTAT
GI_10835156-S-2 RefSeq NM_000597.1 GAGGCCTGGTGGAGAACCACGTGGACAGCACCATGAACAT

Total number of rows: 1506

Table truncated, full table size 118 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL5826.dap.gz 206.3 Kb (ftp)(http) DAP

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