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Platform GPL5873 Query DataSets for GPL5873
Status Public on Jun 10, 2008
Title DASL Custom Prostate Panel by Gene
Technology type oligonucleotide beads
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol http://www.illumina.com/pages.ilmn?ID=5
 
Description Panel contains 526 probe sets (typically three probes/set). Of these 481 were potentially prostate cancer relevant based upon markers of prostate cancer aggressiveness identified by a Mayo/University of Minnesota Partnership (PMID: 17376245) and previously published studies.
DASL Custom Prostate Panel by Probe may be viewed at GPL5831.
 
Web link http://www.illumina.com/downloads/DASLvsDirectHyb.pdf
Contributor(s) Kollmeyer TM, Nakagawa T, Jenkins RB
Submission date Sep 16, 2007
Last update date Jun 10, 2008
Contact name Robert B. Jenkins
E-mail(s) rjenkins@mayo.edu
Organization name Mayo Clinic
Department Laboratory Medicine and Pathology
Street address 200 First Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Samples (596) GSM268274, GSM268275, GSM268276, GSM268277, GSM268278, GSM268279 
Series (1)
GSE10645 Focused gene expression microarray of tumors from 596 men with prostate cancer using RNA from archival FFPE tissue

Data table header descriptions
ID target ID
SequenceSource source of the target sequence accession
GB_ACC GenBank or RefSeq identifier
SPOT_ID spot identifier for array features lacking GenBank or RefSeq accession numbers

Data table
ID SequenceSource GB_ACC SPOT_ID
1557685_at-S GenBank AI620018
1560225_at-S GenBank BC037581
1561073_at-S GenBank AF085868
213310_at-S GenBank BC054491
214174_s_at-S GenBank BX372635
214384_s_at-S Affymetrix based:214384_s_at
216584_at-S GenBank BF671132
225311_at-S GenBank AK122922
228178_s_at-S Affymetrix based:228178_s_at
228687_at-S GenBank BF726306
228798_x_at-S Affymetrix based:228798_x_at
229455_at-S GenBank AL833303
231181_at-S Affymetrix based:231181_at
231651_at-S GenBank DB444173
233424_at-S GenBank AK022084
235196_at-S Affymetrix based:235196_at
236338_at-S Affymetrix based:236338_at
236472_at-S GenBank AW968846
240093_x_at-S Affymetrix based:240093_x_at
240236_at-S Affymetrix based:240236_at

Total number of rows: 526

Table truncated, full table size 17 Kbytes.




Download family Format
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Supplementary data files not provided

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