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Status
Public on Oct 28, 2008
Title
Agilent-011447 Yeast Oligo Microarray (G4140A) - alternative version
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Saccharomyces cerevisiae
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4140A
Description
This is an alternative version of the official Agilent platform assigned accession number GPL884. The ID column includes the Agilent probe identifiers instead of the Agilent feature IDs. This oligonucleotide microarray will enable researchers to simultaneously characterize expression of many thousands of yeast genes and identify gene activity during important biological processes, such as yeast growth, adaptation, response to drug candidates and reproduction.
Submission date
Oct 29, 2007
Last update date
Oct 28, 2008
Contact name
Yohan Jin
Organization name
NIEHS
Street address
111 TW Alexander Dr.
City
RTP
State/province
NC
ZIP/Postal code
27709
Country
USA
Samples (101)
GSM240140 , GSM240141 , GSM240142 , GSM240143 , GSM240144 , GSM240145
GSM240146 ,
GSM240147 ,
GSM240148 ,
GSM240149 ,
GSM240150 ,
GSM240151 ,
GSM240152 ,
GSM240153 ,
GSM240154 ,
GSM240155 ,
GSM240156 ,
GSM240157 ,
GSM240158 ,
GSM240159 ,
GSM240160 ,
GSM240161 ,
GSM240162 ,
GSM240163 ,
GSM240164 ,
GSM240165 ,
GSM240166 ,
GSM240167 ,
GSM240168 ,
GSM240169 ,
GSM240170 ,
GSM240171 ,
GSM240172 ,
GSM240173 ,
GSM240174 ,
GSM240175 ,
GSM240176 ,
GSM240177 ,
GSM240178 ,
GSM240179 ,
GSM240180 ,
GSM240181 ,
GSM240182 ,
GSM240183 ,
GSM240184 ,
GSM240185 ,
GSM240186 ,
GSM240187 ,
GSM240188 ,
GSM240189 ,
GSM240190 ,
GSM240191 ,
GSM240192 ,
GSM240193 ,
GSM240194 ,
GSM240195 ,
GSM240196 ,
GSM240197 ,
GSM240198 ,
GSM240199 ,
GSM240200 ,
GSM240201 ,
GSM240202 ,
GSM240203 ,
GSM240204 ,
GSM240205 ,
GSM240206 ,
GSM240207 ,
GSM240208 ,
GSM240209 ,
GSM240210 ,
GSM240211 ,
GSM240212 ,
GSM240213 ,
GSM240214 ,
GSM240215 ,
GSM240216 ,
GSM240217 ,
GSM240218 ,
GSM240219 ,
GSM240220 ,
GSM240221 ,
GSM240222 ,
GSM240223 ,
GSM748561 ,
GSM748562 ,
GSM748563 ,
GSM748564 ,
GSM748565 ,
GSM748566 ,
GSM748567 ,
GSM748568 ,
GSM748569 ,
GSM748570 ,
GSM748571 ,
GSM901165 ,
GSM901166 ,
GSM901167 ,
GSM901168 ,
GSM901169 ,
GSM901170
Series (4)
GSE9466
Transcriptome in yeast by exposure of 7 transition metals
GSE30228
Transcriptome profiling reveals a novel role for Trichostatin A in antagonizing histone chaperone Chz1 mediated telomere anti-silencing.
GSE36793
A role for the nucleoporin Nup170p in chromatin structure and gene silencing [Agilent microarrays]
GSE36795
A role for the nucleoporin Nup170p in chromatin structure and gene silencing
Data table header descriptions
ID
Agilent probe identifier
NAME
CONTROL_TYPE
Control type
ORF
GENE_SYMBOL
Gene Symbol
ACCESSION_STRING
Accession String
DESCRIPTION
Description
Data table
ID
NAME
CONTROL_TYPE
ORF
GENE_SYMBOL
ACCESSION_STRING
DESCRIPTION
A_06_P1001
Q0010
FALSE
Q0010
ORF:Q0010
sgd|Q0010
BioProcess=biological_process unknown|MolFunction=molecular_function unknown|CellComponent=not yet annotated
A_06_P1002
Q0017
FALSE
Q0017
ORF:Q0017
sgd|Q0017
BioProcess=biological_process unknown|MolFunction=molecular_function unknown|CellComponent=not yet annotated
A_06_P1003
Q0045
FALSE
Q0045
COX1
sgd|Q0045
BioProcess=aerobic respiration|MolFunction=cytochrome c oxidase|CellComponent=respiratory chain complex IV (sensu Eukarya)
A_06_P1004
Q0050
FALSE
Q0050
AI1
sgd|Q0050
BioProcess=mRNA processing|MolFunction=not yet annotated|CellComponent=not yet annotated
A_06_P1005
Q0055
FALSE
Q0055
AI2
sgd|Q0055
BioProcess=mRNA processing|MolFunction=not yet annotated|CellComponent=not yet annotated
A_06_P1006
Q0060
FALSE
Q0060
AI3
sgd|Q0060
BioProcess=mRNA processing|MolFunction=not yet annotated|CellComponent=not yet annotated
A_06_P1007
Q0065
FALSE
Q0065
AI4
sgd|Q0065
BioProcess=mRNA processing|MolFunction=not yet annotated|CellComponent=not yet annotated
A_06_P1008
Q0070
FALSE
Q0070
AI5_ALPHA
sgd|Q0070
BioProcess=biological_process unknown|MolFunction=molecular_function unknown|CellComponent=not yet annotated
A_06_P1009
Q0075
FALSE
Q0075
AI5_BETA
sgd|Q0075
BioProcess=biological_process unknown|MolFunction=molecular_function unknown|CellComponent=not yet annotated
A_06_P1010
Q0080
FALSE
Q0080
AAP1
sgd|Q0080
BioProcess=ATP synthesis coupled proton transport|MolFunction=hydrogen-transporting two-sector ATPase|CellComponent=proton-transporting ATP synthase complex, coupling factor F(0) (sensu Eukarya)
A_06_P1011
Q0085
FALSE
Q0085
ATP6
sgd|Q0085
BioProcess=ATP synthesis coupled proton transport|MolFunction=hydrogen-transporting two-sector ATPase|CellComponent=proton-transporting ATP synthase complex, coupling factor F(0) (sensu Eukarya)
A_06_P1012
Q0105
FALSE
Q0105
COB
sgd|Q0105
BioProcess=aerobic respiration*|MolFunction=ubiquinol-cytochrome c reductase|CellComponent=respiratory chain complex III (sensu Eukarya)
A_06_P1013
Q0110
FALSE
Q0110
BI2
sgd|Q0110
BioProcess=RNA splicing|MolFunction=nuclease|CellComponent=mitochondrion
A_06_P1014
Q0115
FALSE
Q0115
BI3
sgd|Q0115
BioProcess=RNA splicing|MolFunction=RNA binding|CellComponent=mitochondrion
A_06_P1015
Q0120
FALSE
Q0120
BI4
sgd|Q0120
BioProcess=RNA splicing|MolFunction=RNA binding|CellComponent=mitochondrion
A_06_P1016
Q0130
FALSE
Q0130
OLI1
sgd|Q0130
BioProcess=ATP synthesis coupled proton transport|MolFunction=hydrogen-transporting two-sector ATPase|CellComponent=proton-transporting ATP synthase complex, coupling factor F(0) (sensu Eukarya)
A_06_P1017
Q0140
FALSE
Q0140
VAR1
sgd|Q0140
BioProcess=protein biosynthesis*|MolFunction=structural constituent of ribosome|CellComponent=mitochondrial small ribosomal subunit
A_06_P1018
Q0160
FALSE
Q0160
SCEI
sgd|Q0160
BioProcess=biological_process unknown|MolFunction=not yet annotated|CellComponent=not yet annotated
A_06_P1019
Q0182
FALSE
Q0182
ORF:Q0182
sgd|Q0182
BioProcess=biological_process unknown|MolFunction=molecular_function unknown|CellComponent=not yet annotated
A_06_P1020
Q0250
FALSE
Q0250
COX2
sgd|Q0250
BioProcess=aerobic respiration|MolFunction=cytochrome c oxidase|CellComponent=respiratory chain complex IV (sensu Eukarya)
Total number of rows: 6256 Table truncated, full table size 991 Kbytes .
Supplementary data files not provided