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Platform GPL6464 Query DataSets for GPL6464
Status Public on Aug 26, 2008
Title SCRI Pectobacterium atrosepticum 11K (SCRI_012663_Eca_11k)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Pectobacterium atrosepticum
Manufacturer Agilent
Manufacture protocol Probes designed to Pectobacterium atrosepticum (strain SCRI1043) genome sequence. Microarray manufactured using Ink Jet In Situ Synthesis (IJISS) technology using standard proprietry Agilent methodology (SurePrint) in 2x 11k format.
Support unknown
Coating unknown
 
 
Contributor(s) Toth I, Birch P, Pritchard L, Hedley P, Liu H
Submission date Feb 06, 2008
Last update date Aug 26, 2008
Contact name Pete Hedley
E-mail(s) pete.hedley@scri.ac.uk
Organization name SCRI
Department Genetics
Street address Invergowrie
City Dundee
ZIP/Postal code DD2 5DA
Country United Kingdom
 
Samples (4) GSM269502, GSM269503, GSM269504, GSM269505
Series (1)
GSE10647 DsbA plays a critical and multi-faceted role in the production of secreted virulence factors by Erwinia carotovora

Data table header descriptions
ID
ORF Locus tag
SEQUENCE Nucleotide sequence of 60mer probe
SPOT_ID identifies spots without locus tag

Data table
ID ORF SEQUENCE SPOT_ID
ECAORF0001_1_sense ECA0001 CAGATTCCAGAAGATCCAGCAGAAGAATGGCTAGGATCGTGGGTTAATTTATTTTTTTTT
ECAORF0002_1_sense ECA0002 CGAGGCGCTGCAACACGTACTTATCAACAAGATCCAAACAATTGATGAAATTTTTTTTTT
ECAORF0002_3_sense ECA0002 CGAGGCGCTGCAACACGTACTTATCAACAAGATCCAAACAATTGATGAAATTTTTTTTTT
ECAORF0003_1_sense ECA0003 TGGGCGCGTATGATTTTAGCTTCGGTGAAGGCATTTATACTCACATGAAGTTTTTTTTTT
ECAORF0004_1_sense ECA0004 CTTTGACCATATCTGGCGCTTTGATACCGGGTTAAAAAGCCGCTTAATGCGTTTTTTTTT
ECAORF0005_1_sense ECA0005 ATCGGGTACAGGAAAAACAGAATTTCCATGCGCTGCTCGTGAATAACAGTTTTTTTTTTT
ECAORF0006_1_sense ECA0006 CTATCGGGGTGGTTTATGGAGATATAGGAACCAGCCCTCTTTATACGTTATTTTTTTTTT
ECAORF0007_1_sense ECA0007 GAATTTCCATCGTGAACAATATCGCCATGCTGCATCAGATGCGGGTTACATTTTTTTTTT
ECAORF0007_3_sense ECA0007 GAATTTCCATCGTGAACAATATCGCCATGCTGCATCAGATGCGGGTTACATTTTTTTTTT
ECAORF0008_1_sense ECA0008 ACTCCAACCCGTATTAACACATGGCGCTGTTTCCCTTGAGCCTAGCTCACTTTTTTTTTT
ECAORF0009_1_sense ECA0009 GATTCATCGATCCGCAGAATTCCCTCACGACGGTAGATAAGGCTAAAGATCTTTTTTTTT
ECAORF0009_3_sense ECA0009 GATTCATCGATCCGCAGAATTCCCTCACGACGGTAGATAAGGCTAAAGATCTTTTTTTTT
ECAORF0010_1_sense ECA0010 GTTGACGCACAATGTGCCAACGTTTTTGCAGGTGGTTAATGTTGTTACCATTTTTTTTTT
ECAORF0011_1_sense ECA0011 AGAATATCTTCCTCGGTCGTGAATTTACCAACCGCTTCGGTCGTATCGACTTTTTTTTTT
ECAORF0012_1_sense ECA0012 CTGCCCTGGCGGGAATTATTGAAGTCGCACGTTTGTCCTCTGCACAGCCTATTTTTTTTT
ECAORF0013_1_sense ECA0013 CACCAAAATATTGCTGATCAACCCGACTGATTCTGATGCGGTAGGTAATGCATTTTTTTT
ECAORF0014_1_sense ECA0014 AAGATGATATCGGCTCCCGTATTTGTCAGCAGCTATCCAAGGACAATATTTTTTTTTTTT
ECAORF0015_1_sense ECA0015 ATACGCTGCTATATCGTCTGGAACACCCTAACACTGAACCTAATGTGTTGTTTTTTTTTT
ECAORF0016_1_sense ECA0016 AAAAGATCGCTAAAATAGCCTTATTTCGTCAATCGTTGGGCAGAGAGTTAATTTTTTTTT
ECAORF0017_1_sense ECA0017 CTTTCACAATTTGAATTCGCCTGAGGATCTATCCAACTGGGAGGATCATCTTTTTTTTTT

Total number of rows: 5282

Table truncated, full table size 459 Kbytes.




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Supplementary data files not provided

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