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Status
Public on May 22, 2008
Title
Boothroyd Lab Toxoplasma gondii bradyzoite 4K
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Toxoplasma gondii Manufacturer
Boothroyd Lab, Stanford University
Manufacture protocol
PCR products (generated by using 5 µl of overnight bacterial culture as a template) were ethanol precipitated, dried, resuspended in 3x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate), and spotted onto poly-L-lysine-treated glass slides.
Support
glass
Coating
polysine
Contributor(s)
Boyle JP , Cleary M , Singh U , Blader I , Boothroyd JC Submission date
May 09, 2008
Last update date
May 22, 2008
Contact name
Jon Boyle
E-mail(s)
boylej@stanford.edu Organization name
Stanford University School of Medicine
Department
Microbiology and Immunology
Lab
Boothroyd Lab
Street address
299 Campus Drive
City
Stanford
State/province
CA
ZIP/Postal code
92305
Country
USA
Samples (24)
GSM288465 , GSM288466 , GSM288467 , GSM288468 , GSM288469 , GSM288470
GSM288471 ,
GSM288472 ,
GSM288473 ,
GSM288474 ,
GSM288475 ,
GSM288476 ,
GSM288477 ,
GSM288478 ,
GSM288479 ,
GSM288480 ,
GSM288481 ,
GSM288482 ,
GSM288483 ,
GSM288484 ,
GSM288485 ,
GSM288486 ,
GSM288487 ,
GSM288488 Series (2)
GSE11437 Expression QTL mapping of Toxoplasma gondii genes, Bradyzoite array
GSE11515 Expression QTL mapping of Toxoplasma gondii genes
Data table header descriptions ID CloneID Tgzz-based number that cross-references in GenBank (if available)
GB_ACC GenBank Accession number
Ctoxoqual1 Old EST nomenclature
Anno Manual Annotation Notes
Anno2 More manual annotation notes
SPOT_ID Ctoxoqual2 Old EST nomenclature
Data table ID CloneID GB_ACC Ctoxoqual1 Anno Anno2 SPOT_ID Ctoxoqual2 251102
tgzz66a05.r1
AA520938 SHORT EST
251103
tgzz45g06.r1
AA531961 Ctoxoqual_880
ESTs
Ctoxoqual4_821
251106
tgzz65b01.r1
AA520906 Ctoxoqual_401
GRA4
TR:G161922 G161922 DENSE GRANULE PROTEIN PRECURSOR. ;
Ctoxoqual4_374
251107
tgzz56c08.r1
AA519497 Ctoxoqual_1406
GRA5
Tachy
Ctoxoqual4_4388
251109
tgzz37e09.r1
AA520276 Ctoxoqual_3273
ROP2/8
Tachy
Ctoxoqual4_3096
251110
tgzz26b04.r1
AA532043 Ctoxoqual_1406
GRA5
Tachy
Ctoxoqual4_4388
251114
tgzz59d05.r1
AA520421 Ctoxoqual_4385
ESTs
Ctoxoqual4_5729
251116
tgzz48c07.r1
AA531867 Ctoxoqual_1101
60S L11 HOMO
WP:F07D10.1 CE07033 RIBOSOMAL PROTEIN ;
Ctoxoqual4_1021
251119
tgzz55d04.r1
AA519435 HOST cross hyb
251121
tgzz32f05.r1
AA531887 Ctoxoqual_4252
BETAACTIN (HOST by array)
gb:X63432_cds1 ACTIN, CYTOPLASMIC 1 (HUMAN);
Ctoxoqual4_5606
251126
tgzz54g08.r1
AA519302 Ctoxoqual_3993
ESTs
Brady
Ctoxoqual4_5365
251128
tgzz61h06.r1
AA520524 EST
251132
tgzz28a04.r1
AA519714 Ctoxoqual_4019
CYCLOPHILLIN HOMO (HOST?)
gb:X52851_rna1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (HUMAN);
Ctoxoqual4_5388
251133
tgzz67a02.r1
AA520664 HOST crosshyb
251134
tgzz63a01.r1
AA520644 Ctoxoqual_3973
ESTs
Brady
Ctoxoqual4_5346
251140
tgzz57c05.r1
AA519908 Ctoxoqual_4203
HSC70 INTERACTING PROTEIN HOMO
TR:G309692 G309692 HEAT SHOCK-RELATED PROTEIN. ;
Ctoxoqual4_5562
251141
tgzz38e06.r1
AA520128 Ctoxoqual_1032
ESTs
Tachy
Ctoxoqual4_959
251142
tgzz53c04.r1
AA520234 Ctoxoqual_4057
ESTs
Ctoxoqual4_5424
251143
tgzz45f11.r1
AA531957 Ctoxoqual_101
CYST WALL ANTIGEN
TR:G520474 G520474 65 KDA CYST MATRIX PROTEIN. ;
Ctoxoqual4_94
251147
tgzz56h08.r1
AA519531 Ctoxoqual_4039
ESTs
Ctoxoqual4_5407
4403 276 Kbytes .Supplementary data files not provided
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