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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 29, 2002 |
| Title |
Mouse 9K UCLA |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Mus musculus |
| |
|
| Description |
This is the mouse 9K platform from UCLA Microarray Core Facility. This platform fits axon output data including blank spots.
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| |
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| Web link |
http://www.genetics.ucla.edu/microarray/
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| Contributor(s) |
Brown VM, Ossadtchi A, Khan AH, Yee S, Melega WP, Cherry SR, Leahy RM, Smith DJ |
| Submission date |
Feb 13, 2002 |
| Last update date |
Jan 17, 2013 |
| Contact name |
Vanessa Marie Brown |
| E-mail(s) |
dsmith@mednet.ucla.edu
|
| Phone |
310-794-5711
|
| Fax |
310-825-6267
|
| URL |
http://www.pharmacology.ucla.edu/smithlab
|
| Organization name |
UCLA
|
| Department |
Department of Molecular & Medical Pharmacology
|
| Lab |
Desmond Smith, M.D., Ph.D.
|
| Street address |
650 Charles E. Young Dr. South, CHS 23-151
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
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| Samples (80)
|
GSM1126, GSM1127, GSM1383, GSM1384, GSM1385, GSM1386
GSM1387, GSM1388, GSM1389, GSM1390, GSM1391, GSM1392, GSM1393, GSM1394, GSM1395, GSM1396, GSM1397, GSM1398, GSM1399, GSM1400, GSM1401, GSM1402, GSM1403, GSM1404, GSM1405, GSM1406, GSM1407, GSM1408, GSM1409, GSM1410, GSM1411, GSM1412, GSM1413, GSM1414, GSM1415, GSM1416, GSM1417, GSM1418, GSM1419, GSM1420, GSM1421, GSM1422, GSM1423, GSM1424, GSM1425, GSM1426, GSM1427, GSM1428, GSM1429, GSM1430, GSM1431, GSM1432, GSM1433, GSM1434, GSM1435, GSM1436, GSM1437, GSM1438, GSM1439, GSM1440, GSM1441, GSM1442, GSM1443, GSM1444, GSM1445, GSM1446, GSM1447, GSM1448, GSM1449, GSM1450, GSM1451, GSM1452, GSM1453, GSM1454, GSM1455, GSM1456, GSM1457, GSM1458, GSM1459, GSM1460
|
| Series (1) |
| GSE30 |
Multiplex three dimensional brain gene expression mapping in a mouse model of Parkinson's disease |
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| Data table header descriptions |
| ID |
|
| meta_row |
mega block row |
| meta_col |
mega block column |
| row |
minor block row |
| col |
minor block column |
| CLONE_ID |
IMAGE clone ID from manufacturer (Incyte) |
| UNIGENE |
UniGene cluster ID |
| GB_ACC |
GenBank accession number |
| GI |
GenBank identifier number |
| SPOT_ID |
Spot identifier |
| End |
end clone was sequenced from |
| Title |
full gene name/title |
| GENE SYMBOL |
gene abbreviation, usually UniGene |
| Cytoband |
cytoband |
| Chromosome |
chromosome where gene can be found if information available |
| GENE |
Entrez GENE ID |
| Flag |
flag |
| Data table |
| ID |
meta_row |
meta_col |
row |
col |
CLONE_ID |
UNIGENE |
GB_ACC |
GI |
SPOT_ID |
End |
Title |
GENE SYMBOL |
Cytoband |
Chromosome |
GENE |
Flag |
| 1 |
1 |
1 |
1 |
1 |
IMAGE:834712 |
87293 |
AA467053 |
2193193 |
|
5' |
Mus musculus nuclear protein Ytm1p mRNA, complete cds |
|
|
|
|
0 |
| 2 |
1 |
1 |
1 |
2 |
IMAGE:761302 |
62497 |
AA388323 |
2041296 |
|
5' |
ESTs |
|
|
|
|
0 |
| 3 |
1 |
1 |
1 |
3 |
IMAGE:761213 |
46727 |
AA387625 |
2040736 |
|
5' |
ESTs |
|
|
|
|
0 |
| 4 |
1 |
1 |
1 |
4 |
IMAGE:804482 |
29786 |
AA474342 |
2202569 |
|
5' |
ESTs, Moderately similar to The ha1438 gene product is related to a C728 protein encoded in S.cerevisiae chromosome II. [H.sapiens] |
|
|
|
|
0 |
| 5 |
1 |
1 |
1 |
5 |
IMAGE:761018 |
3390 |
AA387258 |
2040409 |
|
5' |
myosin Ib |
Myo1b |
1 24.8 cM |
|
17912 |
0 |
| 6 |
1 |
1 |
1 |
6 |
IMAGE:805218 |
28877 |
AA473123 |
2201350 |
|
5' |
ESTs, Highly similar to UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE [Homo sapiens] |
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|
|
|
0 |
| 7 |
1 |
1 |
1 |
7 |
IMAGE:761038 |
7604 |
AA387579 |
2040525 |
|
5' |
ESTs, Moderately similar to unknown [H.sapiens] |
|
|
|
|
0 |
| 8 |
1 |
1 |
1 |
8 |
IMAGE:774996 |
91405 |
AA387314 |
2040289 |
|
5' |
ESTs |
|
|
|
|
0 |
| 9 |
1 |
1 |
1 |
9 |
IMAGE:779143 |
21712 |
AA467571 |
2193711 |
|
5' |
ESTs, Highly similar to hypothetical protein [H.sapiens] |
|
|
|
|
0 |
| 10 |
1 |
1 |
1 |
10 |
IMAGE:780127 |
|
|
|
|
|
|
|
|
|
|
|
| 11 |
1 |
1 |
1 |
11 |
IMAGE:791503 |
17224 |
AA437432 |
2142346 |
|
5' |
speckle-type POZ protein |
Spop |
11 55.6 cM |
|
20747 |
0 |
| 12 |
1 |
1 |
1 |
12 |
IMAGE:959839 |
45521 |
AA547022 |
2308313 |
|
5' |
ESTs, Weakly similar to myelin gene expression factor [M.musculus] |
|
|
|
|
0 |
| 13 |
1 |
1 |
1 |
13 |
IMAGE:775407 |
87650 |
AI508784 |
4407689 |
|
5' |
ESTs |
|
|
|
|
0 |
| 14 |
1 |
1 |
1 |
14 |
IMAGE:778381 |
27965 |
AA413555 |
2073712 |
|
5' |
ESTs, Weakly similar to ZK856.11 [C.elegans] |
|
|
|
|
0 |
| 15 |
1 |
1 |
1 |
15 |
IMAGE:779847 |
34785 |
AA414733 |
2074880 |
|
5' |
ESTs |
|
|
|
|
0 |
| 16 |
1 |
1 |
1 |
16 |
IMAGE:779824 |
|
|
|
|
|
|
|
|
|
|
|
| 17 |
1 |
1 |
1 |
17 |
IMAGE:318957 |
1541 |
W34029 |
1316157 |
|
5' |
syntrophin, acidic 1 |
Snta1 |
2 84.0 cM |
2 |
20648 |
0 |
| 18 |
1 |
1 |
1 |
18 |
IMAGE:329367 |
27587 |
AI414419 |
4257923 |
|
3' |
ESTs |
|
|
|
|
0 |
| 19 |
1 |
1 |
1 |
19 |
IMAGE:316187 |
21507 |
W14393 |
1283138 |
|
5' |
Mus musculus mRNA for Sid394p, complete cds |
|
|
|
|
0 |
| 20 |
1 |
1 |
1 |
20 |
IMAGE:313529 |
39856 |
W10596 |
1284913 |
|
5' |
ESTs |
|
|
|
|
0 |
Total number of rows: 9504
Table truncated, full table size 776 Kbytes.
| Supplementary data files not provided |
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