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Status |
Public on Jul 10, 2009 |
Title |
SMD Print_1257 |
Technology type |
spotted DNA/cDNA |
Distribution |
non-commercial |
Organism |
Homo sapiens |
Manufacturer |
Stanford Functional Genomics Facility, Stanford School of Medicine |
Manufacture protocol |
Material is transferred from microtiter plate wells to the slide surface by an automated print head
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Support |
glass |
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Submission date |
Dec 11, 2008 |
Last update date |
Jul 10, 2009 |
Contact name |
Jonathan Pollack |
E-mail(s) |
pollack1@stanford.edu
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Phone |
650-736-1987
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Organization name |
Stanford University
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Department |
Pathology
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Lab |
Pollack Lab
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Street address |
269 Campus Drive, CCSR3245A
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City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5176 |
Country |
USA |
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Samples (24)
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GSM350514, GSM350517, GSM350521, GSM350522, GSM350524, GSM350531
GSM350537, GSM350542, GSM350543, GSM350547, GSM350549, GSM741243, GSM741245, GSM741246, GSM741248, GSM741249, GSM741250, GSM741255, GSM741256, GSM741260, GSM741262, GSM741264, GSM741269, GSM741271
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Series (4)
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GSE13914 |
Molecular profiling of breast cancer cell lines defines relevant tumor models (aCGH) |
GSE15376 |
Molecular profiling of breast cancer cell lines defines relevant tumor models |
GSE29953 |
Colorectal Cancer Cell Lines aCGH |
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Data table header descriptions |
ID |
|
MetaColumn |
|
MetaRow |
|
Column |
|
Row |
|
X |
|
Y |
|
Reporter Name |
|
Reporter Species |
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CLONE_ID |
IMAGE clone id |
Reporter BioSequence Database Entry [preferredName] |
|
Repoter Biosequence Type |
|
Repoter BioSequence PolymerType |
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Reporter Group[role] |
|
CompositeSequence Identifier |
|
CompositeSequence Name |
|
ClusterId |
|
Gene Name |
|
Gene Symbol |
|
GeneId |
|
GenBank |
|
CompositeSequence Biosequence Type |
|
CompositeSequence BioSequence PolymerType |
|
Plate Identifier |
|
Plate Row |
|
Plate Column |
|
LUID |
|
Failed |
|
Contaminated |
|
SPOT_ID |
|
Data table |
ID |
MetaColumn |
MetaRow |
Column |
Row |
X |
Y |
Reporter Name |
Reporter Species |
CLONE_ID |
Reporter BioSequence Database Entry [preferredName] |
Repoter Biosequence Type |
Repoter BioSequence PolymerType |
Reporter Group[role] |
CompositeSequence Identifier |
CompositeSequence Name |
ClusterId |
Gene Name |
Gene Symbol |
GeneId |
GenBank |
CompositeSequence Biosequence Type |
CompositeSequence BioSequence PolymerType |
Plate Identifier |
Plate Row |
Plate Column |
LUID |
Failed |
Contaminated |
SPOT_ID |
1 |
1 |
1 |
1 |
1 |
0 |
0 |
IMAGE:342721 |
Homo sapiens |
IMAGE:342721 |
cDNA_clone |
DNA |
Experimental |
|
3689 |
Hs.375957 |
Integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) |
ITGB2 |
3689 |
|
gene |
DNA |
SHGU_108 |
D |
1 |
500301 |
0 |
U |
U |
|
31 |
1 |
1 |
1 |
2 |
0 |
0 |
IMAGE:1636606 |
Homo sapiens |
IMAGE:1636606 |
cDNA_clone |
DNA |
Experimental |
|
7364 |
Hs.654424 |
UDP glucuronosyltransferase 2 family, polypeptide B7 |
UGT2B7 |
7364 |
|
gene |
DNA |
SHGU_3 |
P |
1 |
521109 |
0 |
U |
U |
|
61 |
1 |
1 |
1 |
3 |
0 |
0 |
IMAGE:470393 |
Homo sapiens |
IMAGE:470393 |
cDNA_clone |
DNA |
Experimental |
|
4316 |
Hs.2256 |
matrix metallopeptidase 7 (matrilysin, uterine) |
MMP7 |
4316 |
|
gene |
DNA |
SHGU_7 |
L |
1 |
500253 |
0 |
U |
U |
|
91 |
1 |
1 |
1 |
4 |
0 |
0 |
IMAGE:295843 |
Homo sapiens |
IMAGE:295843 |
cDNA_clone |
DNA |
Experimental |
|
1593 |
Hs.516700 |
Cytochrome P450, family 27, subfamily A, polypeptide 1 |
CYP27A1 |
1593 |
|
gene |
DNA |
SHGU_11 |
H |
1 |
509157 |
0 |
U |
U |
|
121 |
1 |
1 |
1 |
5 |
0 |
0 |
IMAGE:109221 |
Homo sapiens |
IMAGE:109221 |
cDNA_clone |
DNA |
Experimental |
|
23306 |
Hs.591040 |
transmembrane protein 194A |
TMEM194 |
23306 |
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gene |
DNA |
SHGU_15 |
D |
1 |
500877 |
0 |
U |
U |
|
151 |
1 |
1 |
1 |
6 |
0 |
0 |
IMAGE:1455394 |
Homo sapiens |
IMAGE:1455394 |
cDNA_clone |
DNA |
Experimental |
|
54205 |
Hs.437060 |
cytochrome c, somatic |
CYCS |
54205 |
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gene |
DNA |
SHGU_18 |
P |
1 |
516885 |
0 |
U |
U |
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181 |
1 |
1 |
1 |
7 |
0 |
0 |
IMAGE:379376 |
Homo sapiens |
IMAGE:379376 |
cDNA_clone |
DNA |
Experimental |
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|
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SHGU_22 |
L |
1 |
528765 |
0 |
U |
U |
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211 |
1 |
1 |
1 |
8 |
0 |
0 |
IMAGE:261745 |
Homo sapiens |
IMAGE:261745 |
cDNA_clone |
DNA |
Experimental |
|
5305 |
Hs.57079 |
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha |
PIP4K2A |
5305 |
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gene |
DNA |
SHGU_26 |
H |
1 |
510981 |
0 |
U |
U |
|
241 |
1 |
1 |
1 |
9 |
0 |
0 |
IMAGE:265625 |
Homo sapiens |
IMAGE:265625 |
cDNA_clone |
DNA |
Experimental |
|
2230 |
Hs.744 |
ferredoxin 1 |
FDX1 |
2230 |
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gene |
DNA |
SHGU_30 |
D |
1 |
506253 |
0 |
U |
U |
|
271 |
1 |
1 |
1 |
10 |
0 |
0 |
IMAGE:277346 |
Homo sapiens |
IMAGE:277346 |
cDNA_clone |
DNA |
Experimental |
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56913 |
Hs.592180 |
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 |
C1GALT1 |
56913 |
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gene |
DNA |
SHGU_33 |
P |
1 |
518901 |
0 |
U |
U |
|
301 |
1 |
1 |
1 |
11 |
0 |
0 |
IMAGE:289055 |
Homo sapiens |
IMAGE:289055 |
cDNA_clone |
DNA |
Experimental |
|
56899 |
Hs.506458 |
ankyrin repeat and sterile alpha motif domain containing 1B |
ANKS1B |
56899 |
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gene |
DNA |
SHGU_37 |
L |
1 |
507741 |
0 |
U |
U |
|
331 |
1 |
1 |
1 |
12 |
0 |
0 |
IMAGE:241794 |
Homo sapiens |
IMAGE:241794 |
cDNA_clone |
DNA |
Experimental |
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|
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SHGU_41 |
H |
1 |
505029 |
0 |
U |
U |
|
361 |
1 |
1 |
1 |
13 |
0 |
0 |
IMAGE:49336 |
Homo sapiens |
IMAGE:49336 |
cDNA_clone |
DNA |
Experimental |
|
56934 |
Hs.463466 |
carbonic anhydrase X |
CA10 |
56934 |
|
gene |
DNA |
SHGU_45 |
D |
1 |
523341 |
0 |
U |
U |
|
391 |
1 |
1 |
1 |
14 |
0 |
0 |
IMAGE:415682 |
Homo sapiens |
IMAGE:415682 |
cDNA_clone |
DNA |
Experimental |
|
Hs.660215 |
Hs.660215 |
Transcribed locus |
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|
|
gene |
DNA |
SHGU_48 |
P |
1 |
507093 |
0 |
U |
U |
|
421 |
1 |
1 |
1 |
15 |
0 |
0 |
IMAGE:842838 |
Homo sapiens |
IMAGE:842838 |
cDNA_clone |
DNA |
Experimental |
|
10474 |
Hs.386390 |
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like |
TADA3L |
10474 |
|
gene |
DNA |
SHGU_52 |
L |
1 |
512733 |
1 |
U |
U |
|
451 |
1 |
1 |
1 |
16 |
0 |
0 |
IMAGE:362686 |
Homo sapiens |
IMAGE:362686 |
cDNA_clone |
DNA |
Experimental |
|
|
|
|
|
|
|
|
|
SHGU_56 |
H |
1 |
518277 |
2 |
U |
U |
|
481 |
1 |
1 |
1 |
17 |
0 |
0 |
IMAGE:366484 |
Homo sapiens |
IMAGE:366484 |
cDNA_clone |
DNA |
Experimental |
|
9567 |
Hs.276925 |
GTP binding protein 1 |
GTPBP1 |
9567 |
|
gene |
DNA |
SHGU_60 |
D |
1 |
506829 |
0 |
U |
U |
|
511 |
1 |
1 |
1 |
18 |
0 |
0 |
IMAGE:1574642 |
Homo sapiens |
IMAGE:1574642 |
cDNA_clone |
DNA |
Experimental |
|
389337 |
Hs.256206 |
FLJ41603 protein |
FLJ41603 |
389337 |
|
gene |
DNA |
SHGU_63 |
P |
1 |
526581 |
0 |
U |
U |
|
541 |
1 |
1 |
1 |
19 |
0 |
0 |
IMAGE:447616 |
Homo sapiens |
IMAGE:447616 |
cDNA_clone |
DNA |
Experimental |
|
149840 |
Hs.529340 |
Chromosome 20 open reading frame 196 |
C20orf196 |
149840 |
|
gene |
DNA |
SHGU_67 |
L |
1 |
522525 |
0 |
U |
U |
|
571 |
1 |
1 |
1 |
20 |
0 |
0 |
IMAGE:121580 |
Homo sapiens |
IMAGE:121580 |
cDNA_clone |
DNA |
Experimental |
|
|
|
|
|
|
|
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SHGU_71 |
H |
1 |
513957 |
0 |
U |
U |
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Total number of rows: 41472
Table truncated, full table size 7231 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GPL7780.adf.gz |
2.2 Mb |
(ftp)(http) |
ADF |
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