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Platform GPL7780 Query DataSets for GPL7780
Status Public on Jul 10, 2009
Title SMD Print_1257
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Dec 11, 2008
Last update date Jul 10, 2009
Contact name Jonathan Pollack
E-mail(s) pollack1@stanford.edu
Phone 650-736-1987
Organization name Stanford University
Department Pathology
Lab Pollack Lab
Street address 269 Campus Drive, CCSR3245A
City Stanford
State/province CA
ZIP/Postal code 94305-5176
Country USA
 
Samples (24) GSM350514, GSM350517, GSM350521, GSM350522, GSM350524, GSM350531 
Series (4)
GSE13914 Molecular profiling of breast cancer cell lines defines relevant tumor models (aCGH)
GSE15376 Molecular profiling of breast cancer cell lines defines relevant tumor models
GSE29953 Colorectal Cancer Cell Lines aCGH

Data table header descriptions
ID
MetaColumn
MetaRow
Column
Row
X
Y
Reporter Name
Reporter Species
CLONE_ID IMAGE clone id
Reporter BioSequence Database Entry [preferredName]
Repoter Biosequence Type
Repoter BioSequence PolymerType
Reporter Group[role]
CompositeSequence Identifier
CompositeSequence Name
ClusterId
Gene Name
Gene Symbol
GeneId
GenBank
CompositeSequence Biosequence Type
CompositeSequence BioSequence PolymerType
Plate Identifier
Plate Row
Plate Column
LUID
Failed
Contaminated
SPOT_ID

Data table
ID MetaColumn MetaRow Column Row X Y Reporter Name Reporter Species CLONE_ID Reporter BioSequence Database Entry [preferredName] Repoter Biosequence Type Repoter BioSequence PolymerType Reporter Group[role] CompositeSequence Identifier CompositeSequence Name ClusterId Gene Name Gene Symbol GeneId GenBank CompositeSequence Biosequence Type CompositeSequence BioSequence PolymerType Plate Identifier Plate Row Plate Column LUID Failed Contaminated SPOT_ID
1 1 1 1 1 0 0 IMAGE:342721 Homo sapiens IMAGE:342721 cDNA_clone DNA Experimental 3689 Hs.375957 Integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) ITGB2 3689 gene DNA SHGU_108 D 1 500301 0 U U
31 1 1 1 2 0 0 IMAGE:1636606 Homo sapiens IMAGE:1636606 cDNA_clone DNA Experimental 7364 Hs.654424 UDP glucuronosyltransferase 2 family, polypeptide B7 UGT2B7 7364 gene DNA SHGU_3 P 1 521109 0 U U
61 1 1 1 3 0 0 IMAGE:470393 Homo sapiens IMAGE:470393 cDNA_clone DNA Experimental 4316 Hs.2256 matrix metallopeptidase 7 (matrilysin, uterine) MMP7 4316 gene DNA SHGU_7 L 1 500253 0 U U
91 1 1 1 4 0 0 IMAGE:295843 Homo sapiens IMAGE:295843 cDNA_clone DNA Experimental 1593 Hs.516700 Cytochrome P450, family 27, subfamily A, polypeptide 1 CYP27A1 1593 gene DNA SHGU_11 H 1 509157 0 U U
121 1 1 1 5 0 0 IMAGE:109221 Homo sapiens IMAGE:109221 cDNA_clone DNA Experimental 23306 Hs.591040 transmembrane protein 194A TMEM194 23306 gene DNA SHGU_15 D 1 500877 0 U U
151 1 1 1 6 0 0 IMAGE:1455394 Homo sapiens IMAGE:1455394 cDNA_clone DNA Experimental 54205 Hs.437060 cytochrome c, somatic CYCS 54205 gene DNA SHGU_18 P 1 516885 0 U U
181 1 1 1 7 0 0 IMAGE:379376 Homo sapiens IMAGE:379376 cDNA_clone DNA Experimental SHGU_22 L 1 528765 0 U U
211 1 1 1 8 0 0 IMAGE:261745 Homo sapiens IMAGE:261745 cDNA_clone DNA Experimental 5305 Hs.57079 Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha PIP4K2A 5305 gene DNA SHGU_26 H 1 510981 0 U U
241 1 1 1 9 0 0 IMAGE:265625 Homo sapiens IMAGE:265625 cDNA_clone DNA Experimental 2230 Hs.744 ferredoxin 1 FDX1 2230 gene DNA SHGU_30 D 1 506253 0 U U
271 1 1 1 10 0 0 IMAGE:277346 Homo sapiens IMAGE:277346 cDNA_clone DNA Experimental 56913 Hs.592180 Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 C1GALT1 56913 gene DNA SHGU_33 P 1 518901 0 U U
301 1 1 1 11 0 0 IMAGE:289055 Homo sapiens IMAGE:289055 cDNA_clone DNA Experimental 56899 Hs.506458 ankyrin repeat and sterile alpha motif domain containing 1B ANKS1B 56899 gene DNA SHGU_37 L 1 507741 0 U U
331 1 1 1 12 0 0 IMAGE:241794 Homo sapiens IMAGE:241794 cDNA_clone DNA Experimental SHGU_41 H 1 505029 0 U U
361 1 1 1 13 0 0 IMAGE:49336 Homo sapiens IMAGE:49336 cDNA_clone DNA Experimental 56934 Hs.463466 carbonic anhydrase X CA10 56934 gene DNA SHGU_45 D 1 523341 0 U U
391 1 1 1 14 0 0 IMAGE:415682 Homo sapiens IMAGE:415682 cDNA_clone DNA Experimental Hs.660215 Hs.660215 Transcribed locus gene DNA SHGU_48 P 1 507093 0 U U
421 1 1 1 15 0 0 IMAGE:842838 Homo sapiens IMAGE:842838 cDNA_clone DNA Experimental 10474 Hs.386390 Transcriptional adaptor 3 (NGG1 homolog, yeast)-like TADA3L 10474 gene DNA SHGU_52 L 1 512733 1 U U
451 1 1 1 16 0 0 IMAGE:362686 Homo sapiens IMAGE:362686 cDNA_clone DNA Experimental SHGU_56 H 1 518277 2 U U
481 1 1 1 17 0 0 IMAGE:366484 Homo sapiens IMAGE:366484 cDNA_clone DNA Experimental 9567 Hs.276925 GTP binding protein 1 GTPBP1 9567 gene DNA SHGU_60 D 1 506829 0 U U
511 1 1 1 18 0 0 IMAGE:1574642 Homo sapiens IMAGE:1574642 cDNA_clone DNA Experimental 389337 Hs.256206 FLJ41603 protein FLJ41603 389337 gene DNA SHGU_63 P 1 526581 0 U U
541 1 1 1 19 0 0 IMAGE:447616 Homo sapiens IMAGE:447616 cDNA_clone DNA Experimental 149840 Hs.529340 Chromosome 20 open reading frame 196 C20orf196 149840 gene DNA SHGU_67 L 1 522525 0 U U
571 1 1 1 20 0 0 IMAGE:121580 Homo sapiens IMAGE:121580 cDNA_clone DNA Experimental SHGU_71 H 1 513957 0 U U

Total number of rows: 41472

Table truncated, full table size 7231 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GPL7780.adf.gz 2.2 Mb (ftp)(http) ADF

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