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Platform GPL8192 Query DataSets for GPL8192
Status Public on Jun 14, 2009
Title S. cerevisiae UNC_OIRF_INT_N array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
Manufacturer Lieb Lab UNC Chapel Hill
Manufacture protocol as Iyers et al.
Support glass
Coating polysine
 
Description 14976 ORF and intergenic spots
 
Web link https://genome.unc.edu/
Contributor(s) Azvolinsky A
Submission date Feb 14, 2009
Last update date Jun 14, 2009
Contact name Anna Azvolinsky
E-mail(s) aazvolin@gmail.com
Organization name Princeton University
Department Molecular Biology
Lab Zakian Lab
Street address Washington Road
City Princeton
State/province NJ
ZIP/Postal code 08540
Country USA
 
Samples (16) GSM406401, GSM406541, GSM406542, GSM406543, GSM406544, GSM406545 
Series (1)
GSE16218 Mapping Replication Fork Pause Sites in S. cerevisiae

Data table header descriptions
ID
BLOCK block on the array
COLUMN column within array
ROW row within array
NAME genomic fragment
ORF gene
Array_ID identifies spot on the array
SEQUENCE sequence of fragments on the array
SPOT_ID spot identifier
PLATE_ID identifies spot on plate
PLATE_ROW row within plate
PLATE_COLUMN column within plate

Data table
ID BLOCK COLUMN ROW NAME ORF Array_ID SEQUENCE SPOT_ID PLATE_ID PLATE_ROW PLATE_COLUMN
1 1 1 1 IYOR260W 13199 ATATAAACTTATGTATATTCCTTCAGTCTCTTTAATAGAGACCAAGTAAGTAAGTGGACGAGAATAGAGGCGATATTATGCATTTATATTTGAAATTCAACAGAACATAATTATGCTTAAGCAAATTAACATGTTGTATTAATACATAGCGTTTTACACATCTATTTCATATATTATGTTATGTTAATTTTTGAAT INTERGENIC IYOR260W 40051 D 1
2 1 2 1 IYOR267C 13205 TCTTTATACGAGAAATAGTTCTACCGTATTATTATAATTATTAGTGTTATTATTTTTGTTTTCGATCAATTCTAGCGGAGCTACAATGTGGTAGTCAAACGCTGCTATTGTATTTAATTCCGGCTCGAGACCAGTCTGGAAAGTCGACGTATATCGTTACTACTATCCTTTTTTTATTATTCCTACTATTTCCTTATTGAAAAAGTGGAAAACTGTTAAATCTGGAAATTCTTCACGATTCTAGAAAAATAGGAG INTERGENIC IYOR267C 40051 D 13
3 1 3 1 IYOR287C 13222 TTTTTAACCTTCTAGTGCTTATTGACCCTCTATACAATTTTTGGATGGCAATTTAATTATACTATTTAGTACTTATTCTTATGCCCCAGTTTTCCGGTAGAAAGGCAAGCTCATCGGTTGAAAATTTTCAAAGCGGGTAATAAACGTGTCTTTCGGTATTTAACCGCTCAGATAAAAGTTATTATTGCAAATAAAAGTAAACGTCCATGCCATCAGTTAGTGGACTATATAGATACATATGTTGTGTTTAATTAG INTERGENIC IYOR287C 40051 H 1
4 1 4 1 IYOR292C 13227 TCTACAGAATTGAAAAAACTTTCGAAATATATACTCTGAGTTCTTGCTCCCCGTTTTGTACGATGTTCCTAATGCAAACACACGTCCTTTAAAGATCCCCTGATAGGTTTCATTAAAGGCAACTTCCATACACGTTGAAGTGCCAATTTTTTCCCTACATCCAAGCATTCTGGGTTTGTATGGGTGTTACACCGGTTTTTCTTTTTTATTTCCAGAGAAGTACAATTTTAGGCGGGTTTCAAATTTCCCCTGTGT INTERGENIC IYOR292C 40051 H 13
5 1 5 1 IYOR311C 13245 TATTGTCTGTAAACCCTGTATGAATCCAAATGACAGAAATGCGTAGATATCTGTTTACGTAATGTTCAACTGCTCTACGACAACACCGCTCAGGATTTTTATAATTACGCTACGTTTTATATTTATCGCAGAAAAACCAATAATTTGTTACCCGCTATGGACCCTGGATTTTGTAAAGATACATGGCATGACATTGTGCTTTCACGCTGGTAGTGCATAATGTAAGAGAAGAAACAGGATATATTTTAAAATTTC INTERGENIC IYOR311C 40051 L 1
6 1 6 1 IYOR316C-1 13251 GTATTTAATGTAGCTACCACGCGTATTCGATACACTATTATTTTTCTTGACTTAGTATGTCAATTGTAGGTAGCCTCATGATGCCCTCTTGATCTAAGCGCGGTGAAAGTCCGCAGGCAATTGCTATAATACTGACAAAATTTATAAGGGGAGAGGGTCTTTTTTCGGTCCGCACGGAGCGGGCGAAGAAAACGTAGCGGTGAGAAAAGAATACGTCACCAAAGTATCAGAAACGTCACTGCGTTGTAGATGTAA INTERGENIC IYOR316C-1 40051 L 13
7 1 7 1 IYOR337W 13269 ACGATCTTTATATTTGTCACCTTTTCCGTATCGGCGGCTAAAAGGCGATGCGGTGCACAGGCGCGGGGTCCCTGGGAAAAAGAAATGTTCAAATTAACATTTCTTTTTCTTGTTTTGTGGCTCTTCTAGAAGGATTTTTAATCAGCATAGCCTGCGTTAAAATTTTTTACCGGATCTTATATATCTAAGACATCTACTCTGTTTAAATACTTAACGAACATCATAGAGAATCAACTAATAATATAGATTAGAAAA INTERGENIC IYOR337W 40051 P 1
8 1 8 1 IYOR343C 13275 TCGCTACGAGATGTTAGCAGCCTCAGAGCATCCTAATGGGAATATCAATGCATACACACCGGAGCTTGGATATGATAAACGAAATATTCTTGAATCGTGAGATCGCCTGTTTTCAAAACCGTTGGAGGCAGAAACAATTTTGTCACAAGATGGGCATTCTACCCCATCCTTGCTGTATTATTGTAGTCTCGCTTTCTTTTATGCTGGACAAATGAGACTACTGCACATTTTTATACGTTCTTGGTTTTTTTTAAA INTERGENIC IYOR343C 40051 P 13
9 1 9 1 IYOR260W 13199 ATATAAACTTATGTATATTCCTTCAGTCTCTTTAATAGAGACCAAGTAAGTAAGTGGACGAGAATAGAGGCGATATTATGCATTTATATTTGAAATTCAACAGAACATAATTATGCTTAAGCAAATTAACATGTTGTATTAATACATAGCGTTTTACACATCTATTTCATATATTATGTTATGTTAATTTTTGAAT INTERGENIC IYOR260W 40051 D 1
10 1 10 1 IYOR267C 13205 TCTTTATACGAGAAATAGTTCTACCGTATTATTATAATTATTAGTGTTATTATTTTTGTTTTCGATCAATTCTAGCGGAGCTACAATGTGGTAGTCAAACGCTGCTATTGTATTTAATTCCGGCTCGAGACCAGTCTGGAAAGTCGACGTATATCGTTACTACTATCCTTTTTTTATTATTCCTACTATTTCCTTATTGAAAAAGTGGAAAACTGTTAAATCTGGAAATTCTTCACGATTCTAGAAAAATAGGAG INTERGENIC IYOR267C 40051 D 13
11 1 11 1 IYOR287C 13222 TTTTTAACCTTCTAGTGCTTATTGACCCTCTATACAATTTTTGGATGGCAATTTAATTATACTATTTAGTACTTATTCTTATGCCCCAGTTTTCCGGTAGAAAGGCAAGCTCATCGGTTGAAAATTTTCAAAGCGGGTAATAAACGTGTCTTTCGGTATTTAACCGCTCAGATAAAAGTTATTATTGCAAATAAAAGTAAACGTCCATGCCATCAGTTAGTGGACTATATAGATACATATGTTGTGTTTAATTAG INTERGENIC IYOR287C 40051 H 1
12 1 12 1 IYOR292C 13227 TCTACAGAATTGAAAAAACTTTCGAAATATATACTCTGAGTTCTTGCTCCCCGTTTTGTACGATGTTCCTAATGCAAACACACGTCCTTTAAAGATCCCCTGATAGGTTTCATTAAAGGCAACTTCCATACACGTTGAAGTGCCAATTTTTTCCCTACATCCAAGCATTCTGGGTTTGTATGGGTGTTACACCGGTTTTTCTTTTTTATTTCCAGAGAAGTACAATTTTAGGCGGGTTTCAAATTTCCCCTGTGT INTERGENIC IYOR292C 40051 H 13
13 1 13 1 IYOR311C 13245 TATTGTCTGTAAACCCTGTATGAATCCAAATGACAGAAATGCGTAGATATCTGTTTACGTAATGTTCAACTGCTCTACGACAACACCGCTCAGGATTTTTATAATTACGCTACGTTTTATATTTATCGCAGAAAAACCAATAATTTGTTACCCGCTATGGACCCTGGATTTTGTAAAGATACATGGCATGACATTGTGCTTTCACGCTGGTAGTGCATAATGTAAGAGAAGAAACAGGATATATTTTAAAATTTC INTERGENIC IYOR311C 40051 L 1
14 1 14 1 IYOR316C-1 13251 GTATTTAATGTAGCTACCACGCGTATTCGATACACTATTATTTTTCTTGACTTAGTATGTCAATTGTAGGTAGCCTCATGATGCCCTCTTGATCTAAGCGCGGTGAAAGTCCGCAGGCAATTGCTATAATACTGACAAAATTTATAAGGGGAGAGGGTCTTTTTTCGGTCCGCACGGAGCGGGCGAAGAAAACGTAGCGGTGAGAAAAGAATACGTCACCAAAGTATCAGAAACGTCACTGCGTTGTAGATGTAA INTERGENIC IYOR316C-1 40051 L 13
15 1 15 1 IYOR337W 13269 ACGATCTTTATATTTGTCACCTTTTCCGTATCGGCGGCTAAAAGGCGATGCGGTGCACAGGCGCGGGGTCCCTGGGAAAAAGAAATGTTCAAATTAACATTTCTTTTTCTTGTTTTGTGGCTCTTCTAGAAGGATTTTTAATCAGCATAGCCTGCGTTAAAATTTTTTACCGGATCTTATATATCTAAGACATCTACTCTGTTTAAATACTTAACGAACATCATAGAGAATCAACTAATAATATAGATTAGAAAA INTERGENIC IYOR337W 40051 P 1
16 1 16 1 IYOR343C 13275 TCGCTACGAGATGTTAGCAGCCTCAGAGCATCCTAATGGGAATATCAATGCATACACACCGGAGCTTGGATATGATAAACGAAATATTCTTGAATCGTGAGATCGCCTGTTTTCAAAACCGTTGGAGGCAGAAACAATTTTGTCACAAGATGGGCATTCTACCCCATCCTTGCTGTATTATTGTAGTCTCGCTTTCTTTTATGCTGGACAAATGAGACTACTGCACATTTTTATACGTTCTTGGTTTTTTTTAAA INTERGENIC IYOR343C 40051 P 13
17 1 17 1 ITG(GCC)P2 7174 AGATTTTATTTTTTGCTCCCTTCTAAAGCTCTGGATGATTCACCAACTTATCCAAGGCAAGGTCCAACTACCGTTTCCTTCGATGAAAAAGACAATAGGTAGCTCTGTCAAACCCCGTGGAAACGCAAACTCATCGGGAGTGTCCTACTGCTTTCCACTAGTTATCCGACTAGCAAGGCAACTAGTCAAGATGAAACCGTCTCACGAACATTTGTATACGATCTCTTCTCCTGATAGACAATGAAATATACCCCG INTERGENIC ITG(GCC)P2 40050 D 1
18 1 18 1 IYPR165W 13756 GGAGTGTCTCGATCTCTCAGTCGTTAACTTAGTGGCAGATACTGCCCTTTTTCAATCCCATTCCTTTTCTCATTGTATGTACGTATGCCTTTTTTTGTTATTTTAGCTCTAACTATAGCTACTTGTTTTTCTCCCAGTATGTGTATAATCTTATTCTTCTCTACATATAAGTGTATTGCTCAGTAAGTATTATCATCTATTAAAGAAGAATAAAAATTATCATGTATTTATTTACAAGTGCGTATCCTATATATA INTERGENIC IYPR165W 40050 D 13
19 1 19 1 IYPR183W 13772 AAGGAAGTGAATGGTAACGAAAAAAAAAAATCTTTCTTTATATGTCTCTTTAAGTACTCCCTTTCAGTTATATGCCTTTTATTGTCTGTCCCTATTCTAATCCTCTACTCGGGCCATCATTGTTAACGTAATATTTGCCCTAGGGTAAAAACATTAGGTTGATTAGGCCATAACTCATTCTGCCCCACCCCCACACATAGGGTTCAGGAACTTGGTTTTCAACCCTACTGCATTGTTTCCCACGCGGCGCTACCA INTERGENIC IYPR183W 40050 H 1
20 1 20 1 IYPR189W 13778 AAAATTTGGATTCGAGATAGTCAATCAAACCTTAATGTAACATTAGTAATAAATTTTATCTTTTCTATAGAGTATAAAAGGTTATTAGACAGAGTTTATCAGCTGTATAGAGTAAT INTERGENIC IYPR189W 40050 H 13

Total number of rows: 14976

Table truncated, full table size 4218 Kbytes.




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