 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Aug 01, 2009 |
| Title |
Agilent Custom Mouse 244K Alternative Splicing Oligo Microarray |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
Agilent |
| Manufacture protocol |
60-mer ink-jet Agilent microarray
|
| |
|
| Description |
A microarray platform to profile alternative splicing levels for 8714 cassette-type alternative exons across a diverse spectrum of mouse tissues.
|
| |
|
| Contributor(s) |
Calarco JA, Superin S, O’Hanlon D, Skalska U, Gabut M, Pan Q, Raj B, Clarke L, Gelinas D, van der Kooy D, Zhen M, Ciruna B, Blencowe BJ |
| Submission date |
May 20, 2009 |
| Last update date |
Aug 01, 2009 |
| Contact name |
Qun Pan |
| E-mail(s) |
qun.pan@utoronto.ca
|
| Organization name |
University of Toronto
|
| Street address |
160 College St.
|
| City |
Toronto |
| ZIP/Postal code |
M5S 3E1 |
| Country |
Canada |
| |
|
| Samples (8)
|
GSM406391, GSM406392, GSM406393, GSM406394, GSM406395, GSM406396
|
| Series (1) |
| GSE16187 |
Regulation of Vertebrate Nervous System-Specific Alternative Splicing and Development by an SR-Related Protein |
|
| Data table header descriptions |
| ID |
|
| SEQUENCE |
Probe sequence |
| GB_ACC |
GenBank or RefSeq Accession number |
| SPOT_ID |
|
| Data table |
| ID |
SEQUENCE |
GB_ACC |
SPOT_ID |
| Mathieu_CA1.C1 |
AGAGTTCGAGGAAGTGGACATCACCATGTCGGAAGAACAGATTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA1.A |
GGCCTGAAGCCACGGCCGGCATCCACGTTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA1.C2 |
ATCTCATGTGCTCAAATTGCCAGCCAGCCGCAGTTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA1.C1A |
AATGGGGATCGATACTGTGGAGACTATGACAGTTTTTTTGAATCGATTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA1.AC2 |
CGGCCGGCATCCACGGGGCTCCACCTGAAGGGTTTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA1.C1C2 |
AATGGGGATCGATACTGTGGAGGGCTCCACCTGAAGGGTTTTTTTTTTTTT |
AK032092 |
|
| Mathieu_CA2.C1 |
TTAGACCACTGTCACGAAGCCATAGAAATAACAAGTGATGACCATGTGTTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA2.A |
GAACTCGCTGACCTACCTAAGAGTGACAAGAACCGGGCTTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA2.C2 |
GGGTTTACTATGCCAGACGGAAATCCGGGGACAGCATCCTTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA2.C1A |
CAAGTGATGACCATGTGATTCAGTATGTCAACCCTGCCTTTGAGTTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA2.AC2 |
CGTGCATCAAGAAGGGAAAGGAGTGGCAGGGGGTTTACTATTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA2.C1C2 |
CAAGTGATGACCATGTGATTCAGGAGTGGCAGGGGGTTTACTATTTTTTTTTTTT |
BE860708 |
|
| Mathieu_CA3.C1 |
CAGCGTTAGACCACTGTCACGAAGCCATAGAAATAACAAGTGATTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA3.A |
GAACTCGCTGACCTACCTAAGAGTGACAAGAACCGGGCTTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA3.C2 |
GGATTCATCGTGACTCCGGGGACAACTCTCAGACAGTTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA3.C1A |
CAAGTGATGACCATGTGATTCAGTATGTCAACCCTGCCTTTGAGTTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA3.AC2 |
CGTGCATCAAGAAGGGAAAGATTCACCGGATTCATCGTGACTTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA3.C1C2 |
CAAGTGATGACCATGTGATTCAGATTCACCGGATTCATCGTGACTTTTTTTTTTTT |
NM_172263 |
|
| Mathieu_CA4.C1 |
AAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGTTTTTTTTTTTT |
CA464515 |
|
| Mathieu_CA4.A |
CTCAGGAGGTGTCTTAGGATAATGAGTCAGCCTTCTCGGCTTTTTTTTTTTT |
CA464515 |
|
Total number of rows: 241400
Table truncated, full table size 20765 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...