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Platform GPL8949 Query DataSets for GPL8949
Status Public on Jun 21, 2010
Title CCDTM miRNA850-version 4 (H. sapiens and EBV subset; condensed)
Technology type spotted oligonucleotide
Distribution non-commercial
Organisms Homo sapiens; human gammaherpesvirus 4
Manufacturer NIH Clinical Center, Dept. of Transfusion Medicine, Immunogenetics Section (NIH/CC/DTM)
Manufacture protocol Oligos sythesized by Operon with 3' amine modification and purified by desalting. Oligos are adjusted to the same concentration and resuspend in 2mM phosphate buffer at 25mM oligo concentration and spotted on CodeLink(TM) Activated Slides (GE Healthcare) using an Omnigrid robotic arrayer (Genomic Solutions).
Support glass
Coating polyacrymide hydrogel polymer
 
Description Derived from GPL7089 07/29/09 - CCDTM miRNA850-version 4
This is a condensed representation of the full array in Platform GPL7089.
 
Submission date Jul 29, 2009
Last update date May 25, 2012
Contact name Francesco Maria Marincola
E-mail(s) fmarincola@sidra.org
Phone 301-793-8210
Organization name Sidra Medical and Research Center
Street address Al Nasr Tower, AL Corniche Street, PO Box 26999
City Doha
ZIP/Postal code PO Box 26999
Country Qatar
 
Samples (8) GSM434664, GSM434665, GSM434666, GSM434667, GSM434668, GSM434669 
Series (1)
GSE17405 Let-7 microRNAs are developmentally regulated in circulating human erythroid cells
Relations
Affiliated with GPL7089

Data table header descriptions
ID NIH mAdb well id plus replicate number
MADB_WELL_ID NIH mAdb plate-well identifier for oligo sample
OLIGO_ID Oligo identifier
DESCRIPTION Description of content
miRNA_ID mirBASE identifiers
SPOT_ID

Data table
ID MADB_WELL_ID OLIGO_ID DESCRIPTION miRNA_ID SPOT_ID
6519885_1 6519885 MIMAT0000075:1a4 hsa-miR-20a hsa-miR-20a
6519889_1 6519889 MIMAT0000267:1a8 hsa-miR-210 hsa-miR-210
6519893_1 6519893 MIMAT0000269:1a12 hsa-miR-212 hsa-miR-212
6519897_1 6519897 MIMAT0000271:1a16 hsa-miR-214 hsa-miR-214
6519981_1 6519981 MIMAT0000084:1e4 hsa-miR-27a hsa-miR-27a
6519985_1 6519985 MIMAT0000690:1e8 hsa-miR-296 hsa-miR-296
6519989_1 6519989 MIMAT0000086:1e12 hsa-miR-29a hsa-miR-29a
6519993_1 6519993 MIMAT0000681:1e16 hsa-miR-29c hsa-miR-29c
6520077_1 6520077 MIMAT0000761:1i4 hsa-miR-324-5p hsa-miR-324-5p
6520081_1 6520081 MIMAT0000756:1i8 hsa-miR-326 hsa-miR-326
6520085_1 6520085 MIMAT0000091:1i12 hsa-miR-33 hsa-miR-33
6520089_1 6520089 MIMAT0000760:1i16 hsa-miR-331 hsa-miR-331
6520097_1 6520097 MIMAT0000764:1i24 hsa-miR-339 hsa-miR-339
6520181_1 6520181 MIMAT0000727:1m12 hsa-miR-374 hsa-miR-374
6520185_1 6520185 MIMAT0000729:1m16 hsa-miR-376a hsa-miR-376a
6520189_1 6520189 MIMAT0000730:1m20 hsa-miR-377 hsa-miR-377
6520193_1 6520193 MIMAT0000733:1m24 hsa-miR-379 hsa-miR-379
6520273_1 6520273 MIMAT0002865:2a8 hsa-miR-518a-2* hsa-miR-518a-2*
6590308_1 6590308 MIMAT0003739:2a16 mmu-mir-673 mmu-mir-673
6590310_1 6590310 MIMAT0003927:2a20 mdv-mir-M6 mdv-mir-M6

Total number of rows: 592

Table truncated, full table size 35 Kbytes.




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Supplementary data files not provided
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