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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 03, 2009 |
| Title |
Illumina Genome Analyzer (Oryza sativa) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Oryza sativa |
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| Submission date |
Sep 03, 2009 |
| Last update date |
Sep 03, 2009 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (181)
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GSM278571, GSM278572, GSM417505, GSM417506, GSM417507, GSM417508
GSM417509, GSM417510, GSM417511, GSM417512, GSM417513, GSM417514, GSM417515, GSM417516, GSM417517, GSM417518, GSM417519, GSM417520, GSM417521, GSM417522, GSM417523, GSM417524, GSM417525, GSM417526, GSM417527, GSM417528, GSM417529, GSM417530, GSM417531, GSM417532, GSM417533, GSM417534, GSM417535, GSM417536, GSM417537, GSM417538, GSM417539, GSM417540, GSM434596, GSM455938, GSM455939, GSM455962, GSM455963, GSM455964, GSM455965, GSM489067, GSM489068, GSM489069, GSM489070, GSM489071, GSM489072, GSM489073, GSM489074, GSM489075, GSM489076, GSM489077, GSM489078, GSM489079, GSM489080, GSM489081, GSM489082, GSM489083, GSM489084, GSM489085, GSM489086, GSM489087, GSM489088, GSM489089, GSM489090, GSM520634, GSM520635, GSM520636, GSM520637, GSM520638, GSM520639, GSM520640, GSM521318, GSM521319, GSM530102, GSM535486, GSM562942, GSM562943, GSM562944, GSM562945, GSM562946, GSM562947, GSM571077, GSM571078, GSM629189, GSM629190, GSM629191, GSM629192, GSM629193, GSM629194, GSM629195, GSM629196, GSM629197, GSM629198, GSM629199, GSM629201, GSM629202, GSM629203, GSM629205, GSM629206, GSM629207, GSM629208, GSM629209, GSM629210, GSM629211, GSM629213, GSM629214, GSM629215, GSM629216, GSM629218, GSM629219, GSM629220, GSM629221, GSM629222, GSM629223, GSM629224, GSM629225, GSM629226, GSM629227, GSM629228, GSM629229, GSM629230, GSM629231, GSM629232, GSM629233, GSM629234, GSM629235, GSM647192, GSM647193, GSM647194, GSM647195, GSM648139, GSM648140, GSM648141, GSM648142, GSM655033, GSM655034, GSM658110, GSM658111, GSM658112, GSM667578, GSM667579, GSM686039, GSM686040, GSM693279, GSM693280, GSM816687, GSM816690, GSM816692, GSM816694, GSM984437, GSM984438, GSM984439, GSM1004650, GSM1004651, GSM1035300, GSM1035301, GSM1035302, GSM1229044, GSM1229045, GSM1229046, GSM1900090, GSM1900091, GSM1900092, GSM4773968, GSM4773969, GSM4773970, GSM4773971, GSM4773972, GSM4773973, GSM4773974, GSM4773975, GSM4773976, GSM4773977, GSM4773978, GSM4773979, GSM5690349
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| Series (31)
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| GSE11014 |
A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains |
| GSE16631 |
rice whole transcriptome surveyed by RNA-Seq and Paired-end technology |
| GSE17398 |
Transcriptome-wide identification of small RNA targets in rice |
| GSE18248 |
Sequencing of rice degradome |
| GSE18250 |
Profiling of small RNA populations in rice total extract and purified AGO1 complexes |
| GSE18251 |
Identification of small RNAs in rice AGO1 complexes and their targets |
| GSE19602 |
Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids. |
| GSE20748 |
DNA Methylation Mediated by a MicroRNA Pathway |
| GSE20871 |
Single-base resolution DNA methylomes of rice and functional roles of DNA methylation |
| GSE21152 |
Conservation and divergence of methylation patterning in plants and animals |
| GSE21414 |
Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with rice centromeres |
| GSE22763 |
DCL4-Dependent Clusters of PhasiRNAs in Rice. |
| GSE23217 |
Expression profiling of small RNAs in control and H2O2-treated rice seedlings |
| GSE25596 |
Deep Transcriptional Profiling of Rice Using Illumina's Sequencing By Synthesis Technology |
| GSE26357 |
Genome-wide profiling of small RNAs in rice under abiotic stresses |
| GSE26405 |
Roles of RDR701 and DCLs in Rice PhasiRNA biogenesis |
| GSE26610 |
DNase I hypersensitive sites in two tissues of rice |
| GSE26733 |
ChIP-seq to identify the positions of three histone modifications in the rice genome |
| GSE26734 |
Genome-wide High Resolution Mapping of Active Regulatory DNA Elements in the Rice Genome |
| GSE27048 |
Genome-wide maps of chromatin state in rice endosperm |
| GSE27064 |
Rice endosperm: mRNA profiling and H3K27me3 occupancy |
| GSE27699 |
Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus |
| GSE28028 |
Differential expressions of microRNAs involve the development of superior and inferior spikelets in rice (Oryza sativa) |
| GSE32973 |
Massive analysis of rice small RNAs: Mechanistic implications of regulated miRNAs and variants for differential target RNA cleavage |
| GSE40054 |
ChIP-seq analysis of SRT1 and H3K9ac in MH63 and srt1 RNAi. |
| GSE40674 |
Genome-wide maps of H3K27me3 in WT (wild type) and Epi-df (mutant) rice |
| GSE42201 |
Chromatin immunoprecipitation of MADS29 to find the cis regulatory regions and targets of this transcription factor |
| GSE50778 |
Control of agricultural traits by hc-siRNA associated MITEs in rice |
| GSE73657 |
MiRNA analysis of rice seed germination |
| GSE157727 |
Gene expression dynamics in rice peduncles at the heading stage |
| GSE188802 |
chip-seq for MoIug4 in rice |
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| Supplementary data files not provided |
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