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Platform GPL9735 Query DataSets for GPL9735
Status Public on Mar 18, 2010
Title Ambion 14K miRChip V1
Technology type in situ oligonucleotide
Distribution custom-commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus; synthetic construct
Manufacturer Affymetrix
Manufacture protocol Ambion miRChip V1array, manufactured by Affymetrix, offers the most content, with probes for verified Sanger miRNAs and more than 12,000 predicted miRNAs. Ambion array contains Sanger 9.0 content along with predicted miRNA seqeunces described in papers by: Cummins, Proc Natl Acad Sci USA 103(10):3687-92, 2006); Xie, Nature 434(7031):338-45, 2005); Berezikov, Cell 120(1):21-4, 2005) and Bentwich, Nat Genet. 2005 Jul;37(7):766-70.
The probes are up to 25 mers depending on the mature/putative miRNA length. This array is offered exclusively through Asuragen under the DiscovArray miRNA profiling service. For more information go to
Submission date Dec 01, 2009
Last update date Mar 18, 2010
Contact name Sachin Sah
Organization name Asuragen Inc.
Street address 2150 Woodward St, Suite 100
City Austin
State/province TX
ZIP/Postal code 78744
Country USA
Samples (13) GSM477726, GSM477727, GSM477728, GSM477729, GSM477730, GSM477731 
Series (3)
GSE19248 Performance Evaluation of Commercial miRNA Expression Array Platforms
GSE23383 miRNAs in ovarian cancer: A systems approach (miRNA data)
GSE23392 miRNAs in ovarian cancer: A systems approach

Data table header descriptions
ID The unique identifier string for a given probe, matched to Sanger v 9.2
MicroRNA_Accession The Sanger accession of the mature MicroRNA targeted by the probe
miRNA_ID The Sanger ID of the mature MicroRNA targeted by the probe
Source Sanger or Non-Sanger

Data table
ID MicroRNA_Accession miRNA_ID Source SPOT_ID
aga-bantam_st2 MIMAT0001494 aga-bantam Sanger
aga-let-7_st1 MIMAT0001495 aga-let-7 Sanger
aga-miR-1_st1 MIMAT0001496 aga-miR-1 Sanger
aga-miR-10_st1 MIMAT0001497 aga-miR-10 Sanger
aga-miR-124_st1 MIMAT0001499 aga-miR-124 Sanger
aga-miR-13b_st1 MIMAT0001502 aga-miR-13b Sanger
aga-miR-14_st1 MIMAT0001503 aga-miR-14 Sanger
aga-miR-2_st1 MIMAT0001516 aga-miR-2 Sanger
aga-miR-210_st1 MIMAT0001505 aga-miR-210 Sanger
aga-miR-219_st1 MIMAT0001506 aga-miR-219 Sanger
aga-miR-263_st1 MIMAT0001507 aga-miR-263 Sanger
aga-miR-275_st2 MIMAT0001508 aga-miR-275 Sanger
aga-miR-276_st2 MIMAT0001509 aga-miR-276 Sanger
aga-miR-277_st2 MIMAT0001510 aga-miR-277 Sanger
aga-miR-278_st2 MIMAT0001511 aga-miR-278 Sanger
aga-miR-279_st1 MIMAT0001512 aga-miR-279 Sanger
aga-miR-281_st1 MIMAT0001513 aga-miR-281 Sanger
aga-miR-282_st1 MIMAT0001514 aga-miR-282 Sanger
aga-miR-283_st1 MIMAT0001515 aga-miR-283 Sanger
aga-miR-305_st1 MIMAT0001518 aga-miR-305 Sanger

Total number of rows: 14215

Table truncated, full table size 658 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9735_miRChip1s520189F.cdf.gz 543.3 Kb (ftp)(http) CDF

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