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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 22, 2010 |
| Title |
Human 9K CGI Array |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
CapitalBio Corporation |
| Manufacture protocol |
Clone:pGEM-5Zf(-)/Primers:5'-CGG CCG CCT GCA GGT CGA CCT TAA- 3';5'-AAC GCG TTG GGA GCT CTC CCT TAA- 3';oligo synthesize/strandedness:Methylation tolerant E.coli strain XLI-BLUE MRF'/Length:760 bp(Average insert size);Arrayer Harderware:Aminosilane Coated Glass Slides/Software:Arrays were scanned with a confocal LuxScanTM scanner (CapitalBio Corp.), and obtained images were analyzed with LuxScan3.0 TM software (CapitalBio Corp);Spotting protocol:The PCR products were precipitated with ethanol and re-dissolved in EasyArrayTM Spotting Solution (CapitalBio Corp.), then printed in triplicate on Aminosilane Coated Glass Slides using a SmartArrayTM microarrayer (All from CapitalBio Corp.).
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| |
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| Submission date |
Jan 20, 2010 |
| Last update date |
Jan 17, 2013 |
| Contact name |
Kunlin Zhang |
| Organization name |
Chinese Academy of Sciences
|
| Street address |
DaTun Road A4
|
| City |
Beijing |
| ZIP/Postal code |
100101 |
| Country |
China |
| |
|
| Samples (17)
|
GSM499092, GSM499093, GSM499094, GSM499095, GSM499096, GSM499097
GSM499098, GSM499099, GSM499100, GSM499102, GSM499103, GSM499104, GSM499105, GSM499106, GSM499107, GSM499108, GSM499109
|
| Series (1) |
| GSE19974 |
Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array |
|
| Data table header descriptions |
| ID |
|
| Block |
|
| Row |
|
| Column |
|
| Name |
|
| Clone |
|
| Chromosome |
|
| Location |
|
| Gene |
|
| SEQUENCE |
sequence of clone |
| ORF |
|
| SPOT_ID |
|
| Data table |
| ID |
Block |
Row |
Column |
Name |
Clone |
Chromosome |
Location |
Gene |
SEQUENCE |
ORF |
SPOT_ID |
| 1 |
1 |
1 |
1 |
P1 |
|
|
|
|
|
|
--unknown |
| 2 |
1 |
1 |
2 |
P1 |
|
|
|
|
|
|
--unknown |
| 3 |
1 |
1 |
3 |
P1 |
|
|
|
|
|
|
--unknown |
| 4 |
1 |
1 |
4 |
P6 |
|
|
|
|
|
|
--unknown |
| 5 |
1 |
1 |
5 |
P6 |
|
|
|
|
|
|
--unknown |
| 6 |
1 |
1 |
6 |
P6 |
|
|
|
|
|
|
--unknown |
| 7 |
1 |
1 |
7 |
P7 |
|
|
|
|
|
|
--unknown |
| 8 |
1 |
1 |
8 |
P7 |
|
|
|
|
|
|
--unknown |
| 9 |
1 |
1 |
9 |
P7 |
|
|
|
|
|
|
--unknown |
| 10 |
1 |
1 |
10 |
P9 |
|
|
|
|
|
|
--unknown |
| 11 |
1 |
1 |
11 |
P9 |
|
|
|
|
|
|
--unknown |
| 12 |
1 |
1 |
12 |
P9 |
|
|
|
|
|
|
--unknown |
| 13 |
1 |
1 |
13 |
P12 |
|
|
|
|
|
|
--unknown |
| 14 |
1 |
1 |
14 |
P12 |
|
|
|
|
|
|
--unknown |
| 15 |
1 |
1 |
15 |
P12 |
|
|
|
|
|
|
--unknown |
| 16 |
1 |
1 |
16 |
P13 |
|
|
|
|
|
|
--unknown |
| 17 |
1 |
1 |
17 |
P13 |
|
|
|
|
|
|
--unknown |
| 18 |
1 |
1 |
18 |
P13 |
|
|
|
|
|
|
--unknown |
| 19 |
1 |
1 |
19 |
P14 |
|
|
|
|
|
|
--unknown |
| 20 |
1 |
1 |
20 |
P14 |
|
|
|
|
|
|
--unknown |
Total number of rows: 29952
Table truncated, full table size 15475 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL9952_methylationArray.gal.gz |
109.7 Kb |
(ftp)(http) |
GAL |
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|
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