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Series GSE100619 Query DataSets for GSE100619
Status Public on Jun 05, 2018
Title High-Resolution temporal profiling of developing pancreas uncovers the mechanisms of endocrine cell fate determination [Drop-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Drop-sequencing of the whole e14.5 and e16.5 mouse pancreas
 
Overall design Three litters and 39 mouse embryonic day 14.5 pancreata was dissociated to single cells. 15,228 single cells were sequenced using Drop-seq. For e16.5, three litters and 31 embryos were used and 2,006 transcriptomes were recovered by Drop-seq.
 
Contributor(s) Hill M, Scavuzzo M, Borowiak M, Martin J
Citation(s) 30135482
Submission date Jun 28, 2017
Last update date Jul 25, 2021
Contact name Malgorzata Borowiak
E-mail(s) borowiak@bcm.edu
Organization name Baylor College of Medicine
Street address 1 Baylor Plaza
City Houston
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM2689399 e14.5 mouse pancreas_Drop-seq
GSM2689400 e16.5 mouse pancreas_Drop-seq
This SubSeries is part of SuperSeries:
GSE100622 High-Resolution temporal profiling of developing pancreas uncovers the mechanisms of endocrine cell fate determination
Relations
BioProject PRJNA392311
SRA SRP110702

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100619_RAW.tar 29.1 Mb (http)(custom) TAR (of TXT)
GSE100619_README.txt 221 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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