|
| Status |
Public on Jun 05, 2018 |
| Title |
High-Resolution temporal profiling of developing pancreas uncovers the mechanisms of endocrine cell fate determination [ATAC-Seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Chromatin accessibility of endocrine progenitor cells from the e14.5 and e16.5 mouse pancreas
|
| |
|
| Overall design |
fast ATAC-seq of 3 replicates of e14.5 and 3 replicates of e16.5 Ngn3-eGFP+ cells.
|
| |
|
| Contributor(s) |
Hill M, Scavuzzo M, Borowiak M, Martin J |
| Citation(s) |
30135482 |
| |
| Submission date |
Jun 28, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Malgorzata Borowiak |
| E-mail(s) |
borowiak@bcm.edu
|
| Organization name |
Baylor College of Medicine
|
| Street address |
1 Baylor Plaza
|
| City |
Houston |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (6)
|
| GSM2689428 |
Endocrine progenitors at e14.5_ATAC-seq_1 |
| GSM2689429 |
Endocrine progenitors at e14.5_ATAC-seq_2 |
| GSM2689430 |
Endocrine progenitors at e14.5_ATAC-seq_3 |
| GSM2689431 |
Endocrine progenitors at e16.5_ATAC-seq_1 |
| GSM2689432 |
Endocrine progenitors at e16.5_ATAC-seq_2 |
| GSM2689433 |
Endocrine progenitors at e16.5_ATAC-seq_3 |
|
| This SubSeries is part of SuperSeries: |
| GSE100622 |
High-Resolution temporal profiling of developing pancreas uncovers the mechanisms of endocrine cell fate determination |
|
| Relations |
| BioProject |
PRJNA392309 |
| SRA |
SRP110700 |
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