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Series GSE101508 Query DataSets for GSE101508
Status Public on Jul 18, 2017
Title Genome-wide inhibition of pro-atherogenic gene expression by multi-STAT targeting compounds as a novel treatment strategy of CVD
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cardiovascular diseases (CVD), including atherosclerosis, are globally the leading cause of death. Key factors contributing to onset and progression of atherosclerosis and plaque development include the pro-infslammatory cytokines Interferon (IFN)α and IFNγ and the Pattern Recognition Receptor (PRR) Toll-like receptor 4 (TLR4). Together, they trigger activation of members of the Signal Transducer and Activator of Transcription (STAT) family. Searches for STAT3-targeting compounds, exploring the pTyr-SH2 interaction area of STAT3, yielded many small molecules, including STATTIC and STX-0119. However, many of these inhibitors do not seem STAT-specific. We hypothesized that non-specific STAT-inhibitors that simultaneously block STAT1, STAT2 and STAT3 activity and pro-inflammatory target gene expression may be a promising avenue for the treatment of CVD. We developed a pipeline approach combining comparative in silico docking of multiple STAT-SH2 models on multi-million Clean Lead and Clean Drug-Like libraries with in vitro STAT inhibition validation, as a novel STAT-inhibitory selection strategy. This approach allowed us to identify a new type of non-specific STAT inhibitor, C01L_F03 targeting the SH2 domain of STAT1, 2 and 3 with equal affinity. Moreover we observed a similar STAT cross-binding mechanism for STATTIC and STX-0119, leading to genome-wide inhibition of pro-atherogenic gene expression. Consequently, a multi-STAT inhibitory strategy was applied to inhibit endothelial cell (EC) migration, leukocyte adhesion to ECs and impairment of aortic ring contractility under inflammatory conditions. Together, this implicates that multi-STAT inhibition could provide a powerfull approach for the success of combating vascular inflammation in CVD
 
Overall design RNA obtained from HMEC treated with inhibitory compounds and IFNγ+LPS was compared to RNA isolated from untreated HMEC.
 
Contributor(s) Plens-Galaska M, Szelag M, Colladoc A, Marquesc P, Vallejoe S, Ramos-Gonzáleze M, Wesoly J, Sanz MJ, Peiró C, Bluyssen HA
Citation(s) 30283459
Submission date Jul 17, 2017
Last update date Jul 25, 2021
Contact name Martyna Plens Gałąska
E-mail(s) martyna.plens-galaska@amu.edu.pl
Organization name Adam Mickiewicz Univerity
Department Human Molecular Genetics
Street address Umultowska 89
City Poznan
State/province Wielkopolska
ZIP/Postal code 61-614
Country Poland
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (10)
GSM2705187 Untreated rep1
GSM2705188 Untreated rep2
GSM2705189 IFNγ+LPS rep1
Relations
BioProject PRJNA394705

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101508_RAW.tar 26.2 Mb (http)(custom) TAR
GSE101508_non-normalized_data.txt.gz 3.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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