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Series GSE101575 Query DataSets for GSE101575
Status Public on Oct 18, 2017
Title RNA-seq of HBV-infected differentiated HepaRG under RG7834
Organisms Homo sapiens; Hepatitis B virus
Experiment type Expression profiling by high throughput sequencing
Summary Monitor expression of all viral mRNAs including polyA-deficient viral mRNAs
 
Overall design 36 HepaRG + HBV infection; treated with RG7834 100 nM or not treated; timepoints 6h, 9h, 12h, and 24h
 
Contributor(s) Mueller H, Kueng E, Hoflack J, Racek T, Schmucki R, Zhang JD
Citation(s) 29079285
Submission date Jul 18, 2017
Last update date May 15, 2019
Contact name Roland Schmucki
E-mail(s) roland.schmucki@roche.com
Organization name F. Hoffmann - La Roche AG
Street address Grenzacherstrase
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL23794 Illumina HiSeq 2000 (Hepatitis B virus; Homo sapiens)
Samples (24)
GSM2706284 04_6h_NT
GSM2706285 05_6h_NT
GSM2706286 06_6h_NT
Relations
BioProject PRJNA394863
SRA SRP112723

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101575_VEIpolyA-HBV_counts.gct.gz 396 b (ftp)(http) GCT
GSE101575_VEIpolyA-HBV_rpkms.gct.gz 729 b (ftp)(http) GCT
GSE101575_VEIpolyA-human_counts.gct.gz 1.0 Mb (ftp)(http) GCT
GSE101575_VEIpolyA-human_rpkms.gct.gz 1.3 Mb (ftp)(http) GCT
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Raw data are available in SRA
Processed data are available on Series record

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