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| Status |
Public on Oct 20, 2018 |
| Title |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in M truncatula, without TAP treatment |
| Organism |
Medicago truncatula |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
The sRNA population (sequence identity and distribution of abundances) in M truncatula was assessed using High Definition (HD) [Sorefan et al 2012, Xu et al 2015] or standard Illumina adapters; the usage of HD adapters revealed a more diverse population of sRNAs (in particular, it revealed the presence of more unique 24mers)
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| Overall design |
sRNA libraries from M truncatula leafs were created using HD and standard Illumina adapters, without a TAP treatment; the resulting libraries were compared side by side.
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| Contributor(s) |
Xu P, Mohorianu I, Singh A, Dalmay T |
| Citation missing |
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| |
| Submission date |
Aug 11, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Tamas Dalmay |
| E-mail(s) |
T.dalmay@uea.ac.uk
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| Phone |
+44 1603593221
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| Organization name |
University of East Anglia
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| Department |
School of Biological Sciences
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| Street address |
Earlham Road
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| City |
Norwich |
| ZIP/Postal code |
NR4 7TJ |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL23899 |
Illumina HiSeq 2500 (Medicago truncatula) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA398036 |
| SRA |
SRP115305 |
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