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Series GSE104515 Query DataSets for GSE104515
Status Public on Oct 01, 2018
Title The 3’UTR of ArgR regulates the arc operon
Organism Lactococcus cremoris
Experiment type Expression profiling by high throughput sequencing
Summary ArgR and the sRNA from its 3’UTR, ArgX, both regulate the arc operon by influencing transcription and RNA stability/translation respectively
Overall design Two strains, two conditions.
Contributor(s) Van der Meulen SB, Hesseling-Meinders A, de Jong A, Kok J
Citation(s) 31220124
Submission date Oct 02, 2017
Last update date Jul 25, 2021
Contact name Anne de Jong
Phone +31 50 363 2047
Organization name university of Groningen
Department Molecular Genetics
Street address Nijenborgh 7
City Groningen
ZIP/Postal code 9747 AG
Country Netherlands
Platforms (1)
GPL24073 Ion Torrent Proton (Lactococcus lactis subsp. cremoris)
Samples (16)
GSM2802743 MG1363 A
GSM2802744 MG1363 B
GSM2802745 MG1363 Delta CcpA A
BioProject PRJNA412888
SRA SRP119266

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104515_00.ncRNA_supplemented.gff.gz 197.2 Kb (ftp)(http) GFF
GSE104515_00.normalized.rpkm.txt.gz 120.9 Kb (ftp)(http) TXT
GSE104515_RAW.tar 1.4 Mb (http)(custom) TAR (of RPKM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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