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GEO accession:
Series GSE104988
Query DataSets for GSE104988
Status
Public on Oct 03, 2018
Title
KDM5B links cellular transcriptome heterogeneity to therapy resistance
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Other
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30472020
NIH grant(s)
Grant ID
Grant title
Affiliation
Name
R35 CA197623
Targeting intratumor heterogeneity in breast cancer
DANA-FARBER CANCER INSTITUTE
KORNELIA POLYAK
U54 CA193461
Project 3: Single Cell Measures of Intratumor Diversity for Optimal Breast Cancer Therapy
DANA-FARBER CANCER INSTITUTE
KORNELIA POLYAK
Submission date
Oct 15, 2017
Last update date
Jul 25, 2021
Contact name
Kornelia Polyak
E-mail(s)
kornelia_polyak@dfci.harvard.edu
Phone
617-632-2106
Organization name
Dana-Farber Cancer Institute
Department
Medical Oncology
Lab
Polyak
Street address
450 Brookline Ave
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (333)
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More...
GSM2812993
MCF7_1 (Barcode)
GSM2812994
MCF7_2 (Barcode)
GSM2812995
MCF7_3 (Barcode)
GSM2812996
MCF7_4 (Barcode)
GSM2812997
FULR_1 (Barcode)
GSM2812998
FULR_2 (Barcode)
GSM2812999
FULR_3 (Barcode)
GSM2813000
FULR_4 (Barcode)
GSM2813001
TAMR_1 (Barcode)
GSM2813002
TAMR_2 (Barcode)
GSM2813003
TAMR_3 (Barcode)
GSM2813004
TAMR_4 (Barcode)
GSM2813005
MCF7_p15_1 (Barcode)
GSM2813006
MCF7_p15_2 (Barcode)
GSM2813007
MCF7_p15_3 (Barcode)
GSM2813008
MCF7_p15_4 (Barcode)
GSM2813009
C49R_p15_1 (Barcode)
GSM2813010
C49R_p15_2 (Barcode)
GSM2813011
C49R_p15_3 (Barcode)
GSM2813012
C49R_p15_4 (Barcode)
GSM2813013
C70R_p15_1 (Barcode)
GSM2813014
C70R_p15_2 (Barcode)
GSM2813015
C70R_p15_3 (Barcode)
GSM2813016
C70R_p15_4 (Barcode)
GSM2813017
MCF7_p0_1 (Barcode)
GSM2813018
MCF7_p0_2 (Barcode)
GSM2813027
Group1_MCF7_C70_0day_H3K4me2 (ChIP-Seq)
GSM2813028
Group1_MCF7_C70_0day_H3K4me3 (ChIP-Seq)
GSM2813029
Group1_MCF7_C70_14day_H3K4me2 (ChIP-Seq)
GSM2813030
Group1_MCF7_C70_14day_H3K4me3 (ChIP-Seq)
GSM2813031
Group1_MCF7_C70_2day_H3K4me2 (ChIP-Seq)
GSM2813032
Group1_MCF7_C70_2day_H3K4me3 (ChIP-Seq)
GSM2813033
Group1_MCF7_C70_7day_H3K4me2 (ChIP-Seq)
GSM2813034
Group1_MCF7_C70_7day_H3K4me3 (ChIP-Seq)
GSM2813035
Group1_MCF7_input (ChIP-Seq)
GSM2813036
Group2_C70R_input (ChIP-Seq)
GSM2813037
Group2_C70R_0day_H3K4me2 (ChIP-Seq)
GSM2813038
Group2_C70R_C49_2day_H3K4me2 (ChIP-Seq)
GSM2813039
Group2_C70R_C70_2day_H3K4me2 (ChIP-Seq)
GSM2813040
Group2_C70R_0day_H3K4me3 (ChIP-Seq)
GSM2813041
Group2_C70R_C49_2day_H3K4me3 (ChIP-Seq)
GSM2813042
Group2_C70R_C70_2day_H3K4me3 (ChIP-Seq)
GSM2813043
Group2_MCF7_input (ChIP-Seq)
GSM2813044
Group2_MCF7_0day_H3K4me2 (ChIP-Seq)
GSM2813045
Group2_MCF7_C49_2day_H3K4me2 (ChIP-Seq)
GSM2813046
Group2_MCF7_C70_2day_H3K4me2 (ChIP-Seq)
GSM2813047
Group2_MCF7_0day_H3K4me3 (ChIP-Seq)
GSM2813048
Group2_MCF7_C49_2day_H3K4me3 (ChIP-Seq)
GSM2813049
Group2_MCF7_C70_2day_H3K4me3 (ChIP-Seq)
GSM2813050
Group2_C49R_C49_2day_H3K4me2 (ChIP-Seq)
GSM2813051
Group2_C49R_C49_2day_H3K4me3 (ChIP-Seq)
GSM2813052
Group2_C49R_C70_2day_H3K4me2 (ChIP-Seq)
GSM2813053
Group2_C49R_C70_2day_H3K4me3 (ChIP-Seq)
GSM2813054
Group2_C49R_input (ChIP-Seq)
GSM2813055
Group2_C49R_H3K4me2 (ChIP-Seq)
GSM2813056
Group2_C49R_H3K4me3 (ChIP-Seq)
GSM2813057
Group3_C49R_input (ChIP-Seq)
GSM2813058
Group3_C49R_0day_H3K27ac (ChIP-Seq)
GSM2813059
Group3_C49R_C49_2day_H3K27ac (ChIP-Seq)
GSM2813060
Group3_C49R_C70_2day_H3K27ac (ChIP-Seq)
GSM2813061
Group3_C70R_0day_H3K27ac (ChIP-Seq)
GSM2813062
Group3_C70R_C49_2day_H3K27ac (ChIP-Seq)
GSM2813063
Group3_C70R_C70_2day_H3K27ac (ChIP-Seq)
GSM2813064
Group3_MCF7_0day_H3K27ac (ChIP-Seq)
GSM2813065
Group3_MCF7_C49_2day_H3K27ac (ChIP-Seq)
GSM2813066
Group3_MCF7_C70_2day_H3K27ac (ChIP-Seq)
GSM2813067
Group4_C49R_CSS_ER (ChIP-Seq)
GSM2813068
Group4_C49R_E2_45min_ER (ChIP-Seq)
GSM2813069
Group4_C70R_CSS_ER (ChIP-Seq)
GSM2813070
Group4_C70R_E2_45min_ER (ChIP-Seq)
GSM2813071
Group4_MCF7_CSS_ER (ChIP-Seq)
GSM2813072
Group4_MCF7_CSS_input (ChIP-Seq)
GSM2813073
Group4_MCF7_E2_45min_ER (ChIP-Seq)
GSM2813074
Group5_MCF7_input (ChIP-Seq)
GSM2813075
Group5_MCF7_KDM5B (ChIP-Seq)
GSM2813076
Group5_C49R_input (ChIP-Seq)
GSM2813077
Group5_C49R_KDM5B (ChIP-Seq)
GSM2813078
Group5_C70R_input (ChIP-Seq)
GSM2813079
Group5_C70R_KDM5B (ChIP-Seq)
GSM2813080
Group6_FULR_CSS_input (ChIP-Seq)
GSM2813081
Group6_FULR_CSS_H3K4me2 (ChIP-Seq)
GSM2813082
Group6_FULR_CSS_H3K4me3 (ChIP-Seq)
GSM2813083
Group6_MCF7_CSS_input (ChIP-Seq)
GSM2813084
Group6_MCF7_CSS_H3K4me2 (ChIP-Seq)
GSM2813085
Group6_MCF7_CSS_H3K4me3 (ChIP-Seq)
GSM2813086
Group6_TAMR_CSS_input (ChIP-Seq)
GSM2813087
Group6_TAMR_CSS_H3K4me2 (ChIP-Seq)
GSM2813088
Group6_TAMR_CSS_H3K4me3 (ChIP-Seq)
GSM2813089
Group7_FULR_CSSplusinsulin_input (ChIP-Seq)
GSM2813090
Group7_FULR_CSSplusinsulin_KDM5B (ChIP-Seq)
GSM2813091
Group7_MCF7_CSS_input (ChIP-Seq)
GSM2813092
Group7_MCF7_CSS_KDM5B (ChIP-Seq)
GSM2813093
Group7_MCF7_CSSplusE2_input (ChIP-Seq)
GSM2813094
Group7_MCF7_CSSplusE2_KDM5B (ChIP-Seq)
GSM2813095
Group7_MCF7_CSSplusinsulin_input (ChIP-Seq)
GSM2813096
Group7_MCF7_CSSplusinsulin_KDM5B (ChIP-Seq)
GSM2813097
Group7_MCF7_FBS_input (ChIP-Seq)
GSM2813098
Group7_MCF7_FBS_KDM5B (ChIP-Seq)
GSM2813099
Group7_TAMR_CSSplusinsulin_input (ChIP-Seq)
GSM2813100
Group7_TAMR_CSSplusinsulin_KDM5B (ChIP-Seq)
GSM2813101
Group8_C70R_CSS_input (ChIP-Seq)
GSM2813102
Group8_C70R_CSS_E2_45min_KDM5B (ChIP-Seq)
GSM2813103
Group8_C70R_CSS_KDM5B (ChIP-Seq)
GSM2813104
Group8_FULR_CSS_input (ChIP-Seq)
GSM2813105
Group8_FULR_CSS_E2_45min_KDM5B (ChIP-Seq)
GSM2813106
Group8_FULR_CSS_KDM5B (ChIP-Seq)
GSM2813107
Group8_MCF7_CSS_input (ChIP-Seq)
GSM2813108
Group8_MCF7_CSS_E2_45min_KDM5B (ChIP-Seq)
GSM2813109
Group8_MCF7_CSS_KDM5B (ChIP-Seq)
GSM2813110
Group8_TAMR_CSS_input (ChIP-Seq)
GSM2813111
Group8_TAMR_CSS_E2_45min_KDM5B (ChIP-Seq)
GSM2813112
Group8_TAMR_CSS_KDM5B (ChIP-Seq)
GSM2813113
Group9_FULR_C70_ER (ChIP-Seq)
GSM2813114
Group9_FULR_C70plusFUL_ER (ChIP-Seq)
GSM2813115
Group9_FULR_FUL_ER (ChIP-Seq)
GSM2813116
Group9_FULR_ER_input (ChIP-Seq)
GSM2813117
Group9_FULR_ER (ChIP-Seq)
GSM2813118
Group10_FULR_C70_KDM5B (ChIP-Seq)
GSM2813119
Group10_FULR_C70plusFUL_KDM5B (ChIP-Seq)
GSM2813120
Group10_FULR_FUL_KDM5B (ChIP-Seq)
GSM2813121
Group10_FULR_KDM5B_input (ChIP-Seq)
GSM2813122
Group10_FULR_KDM5B (ChIP-Seq)
GSM2813123
Group11_MCF7_input (ChIP-Seq)
GSM2813124
Group11_MCF7_KDM5B (ChIP-Seq)
GSM2813125
Group11_MCF7_C70_5day_KDM5B (ChIP-Seq)
GSM2813126
Group11_C70R_input (ChIP-Seq)
GSM2813127
Group11_C70R_KDM5B (ChIP-Seq)
GSM2813128
Group11_C70R_C70_5day_KDM5B (ChIP-Seq)
GSM2813129
MCF7 (Exome-Seq)
GSM2813130
FULR (Exome-Seq)
GSM2813131
TAMR (Exome-Seq)
GSM2813132
C49R (Exome-Seq)
GSM2813133
C70R (Exome-Seq)
GSM2813134
MCF7.CTL.d00.1 (RNA-Seq)
GSM2813135
MCF7.CTL.d00.2 (RNA-Seq)
GSM2813136
MCF7.BQE.d14.1 (RNA-Seq)
GSM2813137
MCF7.BQE.d14.2 (RNA-Seq)
GSM2813138
MCF7.BQE.d02.1 (RNA-Seq)
GSM2813139
MCF7.BQE.d02.2 (RNA-Seq)
GSM2813140
MCF7.BQE.d07.1 (RNA-Seq)
GSM2813141
MCF7.BQE.d07.2 (RNA-Seq)
GSM2813142
MCF7.BRK.d14.1 (RNA-Seq)
GSM2813143
MCF7.BRK.d14.2 (RNA-Seq)
GSM2813144
MCF7.BRK.d02.1 (RNA-Seq)
GSM2813145
MCF7.BRK.d02.2 (RNA-Seq)
GSM2813146
MCF7.BRK.d07.1 (RNA-Seq)
GSM2813147
MCF7.BRK.d07.2 (RNA-Seq)
GSM2813148
BQER.CTL.d00.1 (RNA-Seq)
GSM2813149
BQER.BQE.d02.1 (RNA-Seq)
GSM2813150
BQER.BRK.d02.1 (RNA-Seq)
GSM2813151
BRKR.CTL.d00.1 (RNA-Seq)
GSM2813152
BRKR.BQE.d02.1 (RNA-Seq)
GSM2813153
BRKR.BRK.d02.1 (RNA-Seq)
GSM2813154
MCF7.CTL.d00.3 (RNA-Seq)
GSM2813155
MCF7.BQE.d14.3 (RNA-Seq)
GSM2813156
MCF7.BQE.d02.3 (RNA-Seq)
GSM2813157
MCF7.BQE.d07.3 (RNA-Seq)
GSM2813158
MCF7.BRK.d14.3 (RNA-Seq)
GSM2813159
MCF7.BRK.d02.3 (RNA-Seq)
GSM2813160
MCF7.BRK.d07.3 (RNA-Seq)
GSM2813161
MCF7.KDM5B.WT.1 (RNA-Seq)
GSM2813162
BQER.E2.h00.1 (RNA-Seq)
GSM2813163
BQER.E2.h03.1 (RNA-Seq)
GSM2813164
BQER.E2.h06.1 (RNA-Seq)
GSM2813165
BRKR.E2.h00.1 (RNA-Seq)
GSM2813166
BRKR.E2.h03.1 (RNA-Seq)
GSM2813167
BRKR.E2.h06.1 (RNA-Seq)
GSM2813168
MCF7.E2.h00.1 (RNA-Seq)
GSM2813169
MCF7.E2.h03.1 (RNA-Seq)
GSM2813170
MCF7.E2.h06.1 (RNA-Seq)
GSM2813171
MCF7.CSS.1 (RNA-Seq)
GSM2813172
FulR.1 (RNA-Seq)
GSM2813173
TAMR.1 (RNA-Seq)
GSM2813174
MCF7.CSS.2 (RNA-Seq)
GSM2813175
FulR.2 (RNA-Seq)
GSM2813176
TAMR.2 (RNA-Seq)
GSM2813177
MCF7.CSS.3 (RNA-Seq)
GSM2813178
FulR.3 (RNA-Seq)
GSM2813179
TAMR.3 (RNA-Seq)
GSM2813180
BQER.E2.h00.2 (RNA-Seq)
GSM2813181
BQER.E2.h03.2 (RNA-Seq)
GSM2813182
BQER.E2.h06.2 (RNA-Seq)
GSM2813183
BRKR.E2.h00.2 (RNA-Seq)
GSM2813184
BRKR.E2.h03.2 (RNA-Seq)
GSM2813185
BRKR.E2.h06.2 (RNA-Seq)
GSM2813186
MCF7.E2.h00.2 (RNA-Seq)
GSM2813187
MCF7.E2.h03.2 (RNA-Seq)
GSM2813188
MCF7.E2.h06.2 (RNA-Seq)
GSM2813189
BQER.E2.h00.3 (RNA-Seq)
GSM2813190
BQER.E2.h03.3 (RNA-Seq)
GSM2813191
BQER.E2.h06.3 (RNA-Seq)
GSM2813192
BRKR.E2.h00.3 (RNA-Seq)
GSM2813193
BRKR.E2.h03.3 (RNA-Seq)
GSM2813194
BRKR.E2.h06.3 (RNA-Seq)
GSM2813195
MCF7.E2.h00.3 (RNA-Seq)
GSM2813196
MCF7.E2.h03.3 (RNA-Seq)
GSM2813197
MCF7.E2.h06.3 (RNA-Seq)
GSM2813198
BQER.CTL.d00.2 (RNA-Seq)
GSM2813199
BQER.BQE.d02.2 (RNA-Seq)
GSM2813200
BQER.BRK.d02.2 (RNA-Seq)
GSM2813201
BRKR.CTL.d00.2 (RNA-Seq)
GSM2813202
BRKR.BQE.d02.2 (RNA-Seq)
GSM2813203
BRKR.BRK.d02.2 (RNA-Seq)
GSM2813204
BQER.CTL.d00.3 (RNA-Seq)
GSM2813205
BQER.BQE.d02.3 (RNA-Seq)
GSM2813206
BQER.BRK.d02.3 (RNA-Seq)
GSM2813207
BRKR.CTL.d00.3 (RNA-Seq)
GSM2813208
BRKR.BQE.d02.3 (RNA-Seq)
GSM2813209
BRKR.BRK.d02.3 (RNA-Seq)
GSM2813210
C49R_1 (RRBS)
GSM2813211
C49R_2 (RRBS)
GSM2813212
C70R_1 (RRBS)
GSM2813213
C70R_2 (RRBS)
GSM2813214
FULR_1 (RRBS)
GSM2813215
FULR_2 (RRBS)
GSM2813216
MCF7_1 (RRBS)
GSM2813217
MCF7_2 (RRBS)
GSM2813218
TAMR_1 (RRBS)
GSM2813219
TAMR_2 (RRBS)
GSM2813220
MCF7 (inDrop)
GSM2813221
pMCF7 (inDrop)
GSM3329882
Group12_BT474_input (ChIP-Seq)
GSM3329883
Group12_BT474_C70_d00_H3K4me2 (ChIP-Seq)
GSM3329884
Group12_BT474_C70_d02_H3K4me2 (ChIP-Seq)
GSM3329885
Group12_BT474_C70_d07_H3K4me2 (ChIP-Seq)
GSM3329886
Group12_BT474_C70_d14_H3K4me2 (ChIP-Seq)
GSM3329887
Group12_BT474_C70_d00_H3K4me3 (ChIP-Seq)
GSM3329888
Group12_BT474_C70_d02_H3K4me3 (ChIP-Seq)
GSM3329889
Group12_BT474_C70_d07_H3K4me3 (ChIP-Seq)
GSM3329890
Group12_BT474_C70_d14_H3K4me3 (ChIP-Seq)
GSM3329891
Group12_FULVR_input (ChIP-Seq)
GSM3329892
Group12_FULVR_C70_d00_H3K4me2 (ChIP-Seq)
GSM3329893
Group12_FULVR_C70_d02_H3K4me2 (ChIP-Seq)
GSM3329894
Group12_FULVR_C70_d07_H3K4me2 (ChIP-Seq)
GSM3329895
Group12_FULVR_C70_d14_H3K4me2 (ChIP-Seq)
GSM3329896
Group12_FULVR_C70_d00_H3K4me3 (ChIP-Seq)
GSM3329897
Group12_FULVR_C70_d02_H3K4me3 (ChIP-Seq)
GSM3329898
Group12_FULVR_C70_d07_H3K4me3 (ChIP-Seq)
GSM3329899
Group12_FULVR_C70_d14_H3K4me3 (ChIP-Seq)
GSM3329900
Group12_SUM159_input (ChIP-Seq)
GSM3329901
Group12_SUM159_C70_d00_H3K4me2 (ChIP-Seq)
GSM3329902
Group12_SUM159_C70_d02_H3K4me2 (ChIP-Seq)
GSM3329903
Group12_SUM159_C70_d07_H3K4me2 (ChIP-Seq)
GSM3329904
Group12_SUM159_C70_d14_H3K4me2 (ChIP-Seq)
GSM3329905
Group12_SUM159_C70_d00_H3K4me3 (ChIP-Seq)
GSM3329906
Group12_SUM159_C70_d02_H3K4me3 (ChIP-Seq)
GSM3329907
Group12_SUM159_C70_d07_H3K4me3 (ChIP-Seq)
GSM3329908
Group12_SUM159_C70_d14_H3K4me3 (ChIP-Seq)
GSM3329909
Group12_T47D_input (ChIP-Seq)
GSM3329910
Group12_T47D_C70_d00_H3K4me2 (ChIP-Seq)
GSM3329911
Group12_T47D_C70_d02_H3K4me2 (ChIP-Seq)
GSM3329912
Group12_T47D_C70_d07_H3K4me2 (ChIP-Seq)
GSM3329913
Group12_T47D_C70_d14_H3K4me2 (ChIP-Seq)
GSM3329914
Group12_T47D_C70_d00_H3K4me3 (ChIP-Seq)
GSM3329915
Group12_T47D_C70_d02_H3K4me3 (ChIP-Seq)
GSM3329916
Group12_T47D_C70_d07_H3K4me3 (ChIP-Seq)
GSM3329917
Group12_T47D_C70_d14_H3K4me3 (ChIP-Seq)
GSM3329918
Group12_ZR75_input (ChIP-Seq)
GSM3329919
Group12_ZR75_C70_d00_H3K4me2 (ChIP-Seq)
GSM3329920
Group12_ZR75_C70_d02_H3K4me2 (ChIP-Seq)
GSM3329921
Group12_ZR75_C70_d07_H3K4me2 (ChIP-Seq)
GSM3329922
Group12_ZR75_C70_d14_H3K4me2 (ChIP-Seq)
GSM3329923
Group12_ZR75_C70_d00_H3K4me3 (ChIP-Seq)
GSM3329924
Group12_ZR75_C70_d02_H3K4me3 (ChIP-Seq)
GSM3329925
Group12_ZR75_C70_d07_H3K4me3 (ChIP-Seq)
GSM3329926
Group12_ZR75_C70_d14_H3K4me3 (ChIP-Seq)
GSM3329927
Group13_MCF7_input (ChIP-Seq)
GSM3329928
Group13_MCF7_H3K79me2 (ChIP-Seq)
GSM3329929
Group13_MCF7_C70_H3K79me2 (ChIP-Seq)
GSM3329930
Group14_MCF7_input (ChIP-Seq)
GSM3329931
Group14_MCF7_CTCF (ChIP-Seq)
GSM3329932
Group14_MCF7_C70_CTCF (ChIP-Seq)
GSM3329933
Group14_FULVR_input (ChIP-Seq)
GSM3329934
Group14_FULVR_CTCF (ChIP-Seq)
GSM3329935
Group14_FULVR_C70_CTCF (ChIP-Seq)
GSM3329936
Group15_MCF7_H3K4me2 (ChIP-Seq)
GSM3329937
Group15_MCF7_H3K4me3 (ChIP-Seq)
GSM3329938
Group15_MCF7_input (ChIP-Seq)
GSM3329939
Group15_MCF7_KDM5A_KO_N1_H3K4me2 (ChIP-Seq)
GSM3329940
Group15_MCF7_KDM5A_KO_N1_H3K4me3 (ChIP-Seq)
GSM3329941
Group15_MCF7_KDM5A_KO_N1_input (ChIP-Seq)
GSM3329942
Group15_MCF7_KDM5A_KO_N2_H3K4me2 (ChIP-Seq)
GSM3329943
Group15_MCF7_KDM5A_KO_N2_H3K4me3 (ChIP-Seq)
GSM3329944
Group15_MCF7_KDM5A_KO_N2_input (ChIP-Seq)
GSM3329945
Group15_MCF7_KDM5B_KO_N1_H3K4me2 (ChIP-Seq)
GSM3329946
Group15_MCF7_KDM5B_KO_N1_H3K4me3 (ChIP-Seq)
GSM3329947
Group15_MCF7_KDM5B_KO_N1_input (ChIP-Seq)
GSM3329948
Group15_MCF7_KDM5B_KO_N2_H3K4me2 (ChIP-Seq)
GSM3329949
Group15_MCF7_KDM5B_KO_N2_H3K4me3 (ChIP-Seq)
GSM3329950
Group15_MCF7_KDM5B_KO_N2_input (ChIP-Seq)
GSM3329951
MCF7_1 20171012 (RNA-Seq)
GSM3329952
MCF7_2 20171012 (RNA-Seq)
GSM3329953
MCF7_3 20171012 (RNA-Seq)
GSM3329954
MCF7_FULV_1 20171012 (RNA-Seq)
GSM3329955
MCF7_FULV_2 20171012 (RNA-Seq)
GSM3329956
MCF7_FULV_3 20171012 (RNA-Seq)
GSM3329957
FULVR_1 20171012 (RNA-Seq)
GSM3329958
FULVR_2 20171012 (RNA-Seq)
GSM3329959
FULVR_3 20171012 (RNA-Seq)
GSM3329960
FULVR_FULV_1 20171012 (RNA-Seq)
GSM3329961
FULVR_FULV_2 20171012 (RNA-Seq)
GSM3329962
FULVR_FULV_3 20171012 (RNA-Seq)
GSM3329963
BT474_1 21118 (RNA-Seq)
GSM3329964
BT474_3 21118 (RNA-Seq)
GSM3329965
BT474_C70_d07_1 21118 (RNA-Seq)
GSM3329966
BT474_C70_d07_3 21118 (RNA-Seq)
GSM3329967
FULVR_1 21118 (RNA-Seq)
GSM3329968
FULVR_3 21118 (RNA-Seq)
GSM3329969
FULVR_C70_d07_1 21118 (RNA-Seq)
GSM3329970
FULVR_C70_d07_3 21118 (RNA-Seq)
GSM3329971
SUM159_1 21118 (RNA-Seq)
GSM3329972
SUM159_3 21118 (RNA-Seq)
GSM3329973
SUM159_C70_d07_1 21118 (RNA-Seq)
GSM3329974
SUM159_C70_d07_3 21118 (RNA-Seq)
GSM3329975
T47D_1 21118 (RNA-Seq)
GSM3329976
T47D_3 21118 (RNA-Seq)
GSM3329977
T47D_C70_d07_1 21118 (RNA-Seq)
GSM3329978
T47D_C70_d07_3 21118 (RNA-Seq)
GSM3329979
ZR75_1 21118 (RNA-Seq)
GSM3329980
ZR75_3 21118 (RNA-Seq)
GSM3329981
ZR75_C70_d07_1 21118 (RNA-Seq)
GSM3329982
ZR75_C70_d07_3 21118 (RNA-Seq)
GSM3329983
BT474_2 20180214 (RNA-Seq)
GSM3329984
BT474_C70_d07_2 20180214 (RNA-Seq)
GSM3329985
FULVR_2 20180214 (RNA-Seq)
GSM3329986
FULVR_C70_d07_2 20180214 (RNA-Seq)
GSM3329987
SUM159_2 20180214 (RNA-Seq)
GSM3329988
SUM159_C70_d07_2 20180214 (RNA-Seq)
GSM3329989
T47D_2 20180214 (RNA-Seq)
GSM3329990
T47D_C70_d07_2 20180214 (RNA-Seq)
GSM3329991
ZR75_2 20180214 (RNA-Seq)
GSM3329992
ZR75_C70_d07_2 20180214 (RNA-Seq)
GSM3329993
BT474, T47D, ZR75 (inDrop)
This SuperSeries is composed of the following SubSeries:
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GSE104981
KDM5B links cellular transcriptome heterogeneity to therapy resistance (Barcode)
GSE104983
KDM5B links cellular transcriptome heterogeneity to therapy resistance (ChIP-Seq)
GSE104984
KDM5B links cellular transcriptome heterogeneity to therapy resistance (Exome-Seq)
GSE104985
KDM5B links cellular transcriptome heterogeneity to therapy resistance (RNA-Seq)
GSE104986
KDM5B links cellular transcriptome heterogeneity to therapy resistance (RRBS)
GSE104987
KDM5B links cellular transcriptome heterogeneity to therapy resistance (inDrop)
Relations
BioProject
PRJNA414335
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE104988_RAW.tar
25.7 Gb
(http)
(custom)
TAR (of BED, BROADPEAK, BW, NARROWPEAK, TSV, TXT)
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