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Series GSE105148 Query DataSets for GSE105148
Status Public on Nov 20, 2018
Title A metabolic checkpoint controls hyphal development in Candida albicans via nitric oxide signaling
Organism Candida albicans
Experiment type Expression profiling by high throughput sequencing
Summary We investigated the roles of mitochondrial dynamics in hyphal growth of C. albicans using the small molecule inhibitor MDIVI-1. Strikingly, the small molecule inhibitor represses both the yeast-to hyphae transition and ongoing filamentation, and its effects on morphogenesis can be uncoupled from general growth inhibition. RNAseq experiments of inhibitor-treated cells coupled with Candida mutant analyses suggest the existence of a novel mechanism of action to represses hyphal growth. The inhibitor was protective to host cells, increasing the survival of bone-marrow derived macrophages in ex vivo macrophage-Candida infection assays, suggesting it has potential as a therapeutic.
 
Overall design Analysis of RNA-seq in C. albicans
 
Contributor(s) Traven A, Harrrison PF, Beilharz TH
Citation(s) 30463019
Submission date Oct 19, 2017
Last update date Sep 08, 2020
Contact name Traude Beilharz
E-mail(s) traude.beilharz@monash.edu
Organization name Monash University
Department Biomedicine Discovery Institute
Lab RNA Systems Biology Laboratory
Street address Wellington Rd
City Clayton
State/province VIC
ZIP/Postal code 3800
Country Australia
 
Platforms (1)
GPL23573 Illumina HiSeq 1500 (Candida albicans)
Samples (28)
GSM2823267 YPD_R1_rep_1
GSM2823268 YPD_R2_rep_1
GSM2823269 FIL_1_rep_1
Relations
BioProject PRJNA414964
SRA SRP120479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105148_read_count.csv.gz 277.6 Kb (ftp)(http) CSV
GSE105148_tail.csv.gz 828.8 Kb (ftp)(http) CSV
GSE105148_tail_count.csv.gz 269.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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