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Series GSE110763 Query DataSets for GSE110763
Status Public on Feb 12, 2019
Title Strain-specific CNV in zebrafish treated with PCB-126, vehicle control, or untreated
Organism Danio rerio
Experiment type Genome variation profiling by array
Summary Strain-specific CNV in zebrafish as determined by competitevly hybridizeing AB, Tuebingen, or WIK individuals exposed to PCB-126, vehicle control, or naïve versus pooled Casper strain
 
Overall design AB, Tuebingen, or WIK individuals exposed to PCB-126 (130 ng/L PCB-126 for 24 hours), vehicle control (20 ppm (v/v) acetone for 24 hours), or naïve (untreated) competitvely hybridized against pooled untreated Casper; n=3/treatment/sex/strain; n=54 total
 
Contributor(s) Holden LA, Brown KH
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 16, 2018
Last update date Feb 13, 2019
Contact name Kim H Brown
E-mail(s) kibr2@pdx.edu
Organization name Portland State University
Department Department of Biology
Lab Brown Lab
Street address 1719 SW 10th Ave
City Portland
State/province OR
ZIP/Postal code 97201
Country USA
 
Platforms (1)
GPL24619 Agilent-049635 ZV9-1M_BrownLabV1
Samples (54)
GSM3016107 muscle_AB_naïve_male_vs_Casper_1
GSM3016108 muscle_AB_naïve_male_vs_Casper_2
GSM3016109 muscle_AB_naïve_male_vs_Casper_3
Relations
BioProject PRJNA434472

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110763_DATAMATRIX_part1_AB.txt.gz 51.1 Mb (ftp)(http) TXT
GSE110763_DATAMATRIX_part2_TU.txt.gz 51.8 Mb (ftp)(http) TXT
GSE110763_DATAMATRIX_part3_WIK.txt.gz 51.7 Mb (ftp)(http) TXT
GSE110763_RAW.tar 5.3 Gb (http)(custom) TAR (of TXT)
Processed data are available on Series record
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