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Series GSE110763 Query DataSets for GSE110763
Status Public on Feb 12, 2019
Title Strain-specific CNV in zebrafish treated with PCB-126, vehicle control, or untreated
Organism Danio rerio
Experiment type Genome variation profiling by array
Summary Strain-specific CNV in zebrafish as determined by competitevly hybridizeing AB, Tuebingen, or WIK individuals exposed to PCB-126, vehicle control, or naïve versus pooled Casper strain
Overall design AB, Tuebingen, or WIK individuals exposed to PCB-126 (130 ng/L PCB-126 for 24 hours), vehicle control (20 ppm (v/v) acetone for 24 hours), or naïve (untreated) competitvely hybridized against pooled untreated Casper; n=3/treatment/sex/strain; n=54 total
Contributor(s) Holden LA, Brown KH
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Submission date Feb 16, 2018
Last update date Feb 13, 2019
Contact name Kim H Brown
Organization name Portland State University
Department Department of Biology
Lab Brown Lab
Street address 1719 SW 10th Ave
City Portland
State/province OR
ZIP/Postal code 97201
Country USA
Platforms (1)
GPL24619 Agilent-049635 ZV9-1M_BrownLabV1
Samples (54)
GSM3016107 muscle_AB_naïve_male_vs_Casper_1
GSM3016108 muscle_AB_naïve_male_vs_Casper_2
GSM3016109 muscle_AB_naïve_male_vs_Casper_3
BioProject PRJNA434472

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110763_DATAMATRIX_part1_AB.txt.gz 51.1 Mb (ftp)(http) TXT
GSE110763_DATAMATRIX_part2_TU.txt.gz 51.8 Mb (ftp)(http) TXT
GSE110763_DATAMATRIX_part3_WIK.txt.gz 51.7 Mb (ftp)(http) TXT
GSE110763_RAW.tar 5.3 Gb (http)(custom) TAR (of TXT)
Processed data are available on Series record

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