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Series GSE111284 Query DataSets for GSE111284
Status Public on Feb 28, 2021
Title Singlet oxygen induced RNA oxidation and translational arrest [flu mutant]
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Effect of various dark incubation times on gene expression in Arabidopsis flu mutant
Overall design Total RNA obtained from 2-week old flu Arabidopsis seedlings incubated for 0, 4h in the dark before exposure to light (30 µE) for 30min
Contributor(s) Koh E, Leshkowitz D, Fluhr R
Citation(s) 36420020
Submission date Feb 28, 2018
Last update date Dec 09, 2022
Contact name Dena Leshkowitz
Organization name Weizmann Institute of Science
Department Bioinformatics Unit, Life Sciences Core Facilities
Street address P.O.B. 26
City Rehovot
ZIP/Postal code 76100
Country Israel
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (6)
GSM3027849 flu 0h, rep1
GSM3027850 flu 0h, rep2
GSM3027851 flu 0h, rep3
This SubSeries is part of SuperSeries:
GSE111288 Singlet oxygen induced RNA oxidation and translational arrest
BioProject PRJNA436412
SRA SRP133701

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111284_Deseq_raw_norm_no_UMI_filter_Flu1b.xlsx 2.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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