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Series GSE112249 Query DataSets for GSE112249
Status Public on Mar 22, 2019
Title Genome-wide map of ETS2 binding in gastrula stage Xenopus.laevis embryos
Organism Xenopus laevis
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We examined the location of ETS2 biding in gastrula stage Xenopus embryos to identify direct transcriptional targets of the FGF signaling pathway.
 
Overall design Examination of tripple-FLAG tagged ETS2 binding in whole Xenopus embryos
 
Contributor(s) Kjolby R, Harland R
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Submission date Mar 23, 2018
Last update date Mar 22, 2019
Contact name Richard Harland
Organization name University of California, Berkeley
Street address Life Sciences Addition #3200
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
 
Platforms (1)
GPL22393 Illumina HiSeq 4000 (Xenopus laevis)
Samples (4)
GSM3062917 Sample 1_ETS2_ChIPseq_A
GSM3062918 Sample 2_ETS2_ChIPseq_C
GSM3062919 Sample 3_ETS2_Input_D
Relations
BioProject PRJNA445381
SRA SRP136318

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112249_ChIPETS_AD_M2_peaks.bed.gz 985.8 Kb (ftp)(http) BED
GSE112249_ChIPETS_AD_M2_treat_pileup.bw 440.4 Mb (ftp)(http) BW
GSE112249_ChIPETS_CF_M2_peaks.bed.gz 2.3 Mb (ftp)(http) BED
GSE112249_ChIPETS_CF_M2_treat_pileup.bw 323.1 Mb (ftp)(http) BW
GSE112249_Ets_common_peaks.bed.gz 496.2 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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