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Series GSE112697 Query DataSets for GSE112697
Status Public on Jan 09, 2019
Title RNA-seq analysis from epididymis and testis of ArKI mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We generated a mouse model (ArKI) in which the two conserved SUMO acceptor lysines of androgen receptor (AR) were permanently abolished by converting them to arginines (ArK381R, K500R). RNA-seq was used to analyse how the lack of AR SUMOylation affects the gene expression pattern of selected tissues.
 
Overall design Initial segment and caput epididymal and testicular mRNA profiles of adult wild type (WT) and ArKI (KI) mice were generated by deep sequencing using Illumina HiSeq 3000 system.
 
Contributor(s) Sipilä P, Palvimo J
Citation(s) 30770815
Submission date Apr 04, 2018
Last update date Feb 27, 2019
Contact name Einari A Niskanen
E-mail(s) einari.niskanen@uef.fi
Organization name University of Eastern Finland
Department School of Medicine
Lab Biomedicine
Street address Yliopistonranta 8
City Kuopio
ZIP/Postal code 70210
Country Finland
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (26)
GSM3081012 IS_KI_1
GSM3081013 IS_KI_2
GSM3081014 IS_KI_3
This SubSeries is part of SuperSeries:
GSE121152 RNA-seq and ChIP-seq analyses of epididymis from ArKI mice
Relations
BioProject PRJNA448753
SRA SRP137143

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112697_countdata.txt.gz 257.8 Kb (ftp)(http) TXT
GSE112697_countdata1.txt.gz 571.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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