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Series GSE11360 Query DataSets for GSE11360
Status Public on Sep 15, 2008
Title Exon-level summary data from Affymetrix Human Exon 1.0 ST array
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The Affymetrix Human Exon 1.0 ST array was used to measure differential splicing patterns in archived RNA isolated from 26 of 80 children (11 Rejectors and 15 Non-Rejectors). The exon-level probe summaries reported in this series were computed using the Affymetrix Power Tools (APT) software and 'rma-sketch' normalization method.
Keywords: Affymetrix 1.0 ST exon array; exon-level analysis
Overall design Exon-level probes were filtered based on APT's detection above background (DABG) p-value greater than 0.05 in n-1 samples leaving 218,402 of the original 287,329 exon-level probes.
Contributor(s) Sindhi R, Higgs BW
Citation(s) 18639552
Submission date May 06, 2008
Last update date Jul 10, 2014
Contact name Rakesh Sindhi
Organization name Children’s Hospital of Pittsburgh
Department Hillman Center for Pediatric Transplantation
Street address 3705 Fifth Avenue
City Pittsburgh
State/province PA
ZIP/Postal code 15213
Country USA
Platforms (1)
GPL5188 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
Samples (26)
GSM287121 subject 1 Liver Rejector
GSM287122 subject 2 Liver Non-rejector
GSM287123 subject 3 Liver Rejector
This SubSeries is part of SuperSeries:
GSE11361 Genetic variants in Major Histocompatibility Complex-linked genes Associate with Pediatric Liver Transplant Rejection
BioProject PRJNA109215

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE11360_RAW.tar 1.6 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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