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| Status |
Public on Sep 15, 2008 |
| Title |
Exon-level summary data from Affymetrix Human Exon 1.0 ST array |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
The Affymetrix Human Exon 1.0 ST array was used to measure differential splicing patterns in archived RNA isolated from 26 of 80 children (11 Rejectors and 15 Non-Rejectors). The exon-level probe summaries reported in this series were computed using the Affymetrix Power Tools (APT) software and 'rma-sketch' normalization method.
Keywords: Affymetrix 1.0 ST exon array; exon-level analysis
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| |
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| Overall design |
Exon-level probes were filtered based on APT's detection above background (DABG) p-value greater than 0.05 in n-1 samples leaving 218,402 of the original 287,329 exon-level probes.
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| |
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| Contributor(s) |
Sindhi R, Higgs BW |
| Citation(s) |
18639552 |
| |
| Submission date |
May 06, 2008 |
| Last update date |
Jul 10, 2014 |
| Contact name |
Rakesh Sindhi |
| Organization name |
Children’s Hospital of Pittsburgh
|
| Department |
Hillman Center for Pediatric Transplantation
|
| Street address |
3705 Fifth Avenue
|
| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15213 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL5188 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
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| Samples (26)
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| This SubSeries is part of SuperSeries: |
| GSE11361 |
Genetic variants in Major Histocompatibility Complex-linked genes Associate with Pediatric Liver Transplant Rejection |
|
| Relations |
| BioProject |
PRJNA109215 |
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