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| Status |
Public on Apr 25, 2018 |
| Title |
Genes specific to cowpea: cowpea vs adzuki bean |
| Platform organism |
Vigna unguiculata |
| Sample organisms |
Vigna angularis; Vigna unguiculata |
| Experiment type |
Genome variation profiling by array
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| Summary |
Comparative hybridization analysis
Microarray-based genomic hybridization was used here as a high-throughput analog to traditional southern hybridization, which is the classical standard method for detecting specific DNA fragments in a genome.
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| Overall design |
Genomic DNA from cowpea and adzuki bean were labeled with fluorochromes Cy3 and Cy5, respectively, purified, combined, and mixed with SeqCap EZ Developer Reagent to hybridize with the Agilent SurePrint G3 Custom Microarray representing 29,728 unigenes from the cowpea unigene assembly P12.
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| Contributor(s) |
Xu P |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Apr 25, 2018 |
| Last update date |
Apr 25, 2018 |
| Contact name |
Pei Xu |
| E-mail(s) |
peixu.zaas@gmail.com
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| Organization name |
Zhejiang Academy of Agricultural Sciences
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| Department |
Vegetable Institute
|
| Street address |
198 Shiqiao Rd
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| City |
Hangzhou |
| ZIP/Postal code |
310021 |
| Country |
China |
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| Platforms (1) |
| GPL24932 |
Agilent-054950 SurePrint G3 Custom Cowpea CGH Microarray (Feature Number version) |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA453500 |
