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Series GSE116054 Query DataSets for GSE116054
Status Public on Jun 05, 2019
Title Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from diverse genera and geographic locations
Organisms Noccaea caerulescens; Thlaspi montanum; Psychotria grandis; Lasiocroton microphyllus; Psychotria revoluta; Psychotria costivenia; Leucocroton havanensis; Psychotria gabriellae; Geissois pruinosa; Geissois racemosa; Homalium kanaliense; Homalium betulifolium; Psychotria semperflorens; [Phyllanthus] conjugatus var. ducosensis; Phyllanthus luciliae
Experiment type Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32583438
Submission date Jun 20, 2018
Last update date Jul 14, 2023
Contact name Sylvain MERLOT
E-mail(s) sylvain.merlot@univ-tlse3.fr
Organization name CNRS
Department Biological Sciences
Lab LRSV
Street address 24, chemin de Borde Rouge
City Auzeville Tolosane
ZIP/Postal code 31320
Country France
 
Platforms (15)
GPL25153 Illumina HiSeq 2000 (Noccaea caerulescens)
GPL25154 Illumina HiSeq 2000 (Thlaspi montanum)
GPL25204 Illumina HiSeq 2000 (Geissois pruinosa)
Samples (43)
GSM3177758 Ncfi_Ni_F
GSM3177759 Ncfi_Ni_R
GSM3177760 Nmon_Ni_F
This SuperSeries is composed of the following SubSeries:
GSE115411 Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Noccaea genus (Brassicaceae) from France
GSE116048 Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Geissois genus (Cunoniaceae) endemic from New Caledonia
GSE116049 Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Leucocroton and Lasiocroton genus (Euphorbiaceae) from Cuba
Relations
BioProject PRJNA476917

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116054_RAW.tar 7.7 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp

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