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Series GSE116914 Query DataSets for GSE116914
Status Public on Jul 12, 2018
Title Identification of the targets of RNA binding protein NSRa [RIP-seq]
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We used RNA immunoprecipitation and sequencing to identify NSRa targets
 
Overall design rRNA depleted RNA was isolated from immunoprecipitation eluate of pNSRa:NSRa:HA and input samples
 
Contributor(s) Bazin J, Romero-Barrios N, Ariel F, Crespi M
Citation(s) 30186296
Submission date Jul 11, 2018
Last update date Jun 13, 2019
Contact name Jeremie Bazin
E-mail(s) jeremie.bazin@free.fr
Organization name CNRS
Lab Institute for Plant Sciences Paris Saclay
Street address B√Ętiment 630, rue de Noetzlin Plateau du Moulon
City Gif Sur Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (6)
GSM3263633 RNA sequencing from RIP input 1
GSM3263634 RNA sequencing from RIP input 2
GSM3263635 RNA sequencing from anti HA IP 1
Relations
BioProject PRJNA480594
SRA SRP153028

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116914_count_RIP.txt.gz 975.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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