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Series GSE117066 Query DataSets for GSE117066
Status Public on Feb 13, 2019
Title Next Generation Sequencing Facilitates Quantitative Analysis of ischemic postconditioning (IPO) to attenuate hepatic ischemia-reperfusion injury in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This is the first study to investigate mRNA expression profiling in regard to hepatic I/R and IPO by next-generation RNA-Seq. Our results may provide an experimental basis for elucidating the underlying mechanism of IPO and reveal candidate biomarkers with which to assess hepatic I/R injury
Overall design liver mRNA profiles of sham, I/R and IPO mice were generated by next-generation sequencing, in triplicate, using Illumina HiSeq 4000.
Contributor(s) Ye Q, Zhang P
Citation(s) 30745817
Submission date Jul 13, 2018
Last update date Mar 19, 2019
Contact name Pengpeng Zhang
Phone 15116256469
Organization name The Third Xiangya Hospital of Central South University
Street address No.138 Tongzipo Road
City Changsha
State/province Hunan
ZIP/Postal code 410013
Country China
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (9)
GSM3269879 N-1
GSM3269880 N-2
GSM3269881 N-3
BioProject PRJNA481000
SRA SRP153358

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117066_Differentially_Expressed_Genes.xlsx 650.3 Kb (ftp)(http) XLSX
GSE117066_Expression_Gene.xlsx 1.6 Mb (ftp)(http) XLSX
GSE117066_Novel_Gene_Expression.xlsx 1.2 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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