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Series GSE117237 Query DataSets for GSE117237
Status Public on Dec 05, 2019
Title Naïve and LCMV Cl13 infected liver tissue of ERT2 AlbCre Ifnar1 fl/fl mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Age- and sex-matched (male, 2-3 months old) ERT2 AlbCre Ifnar fl/fl and ERT2 AlbCre Ifnar +/+ mice were injected intraperitoneally with 40 mg/kg tamoxifen for 5 consective days. Mice were then intravenously infected with 2x10^6 focus forming units of LCMV Cl13 and liver tissue of either genotype was harvested 1.5 days post infection and analyzed for transcriptomic changes (n = 3). Liver tissue of uninfected animals of both genotypes was harvested as control (n = 3).
Overall design We sequenced liver tissue from naïve and LCMV Cl13 infected liver tissue from ERT2 AlbCre Ifnar1 fl/fl mice 1.5 days post infection.
Contributor(s) Lercher A, Bergthaler A, Popa A
Citation(s) 31784108
Submission date Jul 17, 2018
Last update date Mar 05, 2020
Contact name Andreas Bergthaler
Organization name CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Street address Lazarettgasse 14 AKH BT25.3
City Vienna
ZIP/Postal code 1090
Country Austria
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (12)
GSM3348193 BSF_0272_HGLTNBBXX_1#X084_1_S19428
GSM3348194 BSF_0272_HGLTNBBXX_1#X084_3_S19429
GSM3348195 BSF_0272_HGLTNBBXX_1#X084_4_S19430
This SubSeries is part of SuperSeries:
GSE123688 Hepatocyte-intrinsic Ifnar1 signaling modulates hepatic metabolism and adaptive immunity
BioProject PRJNA481515
SRA SRP154187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117237_LiverLCMV_ERT2_AlbCre_Ifnar1_FPKM.txt.gz 2.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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